Paenibacillus pabuli: KET34_05660
Help
Entry
KET34_05660 CDS
T09669
Name
(GenBank) rhamnogalacturonan lyase
KO
K18198
rhamnogalacturonan exolyase [EC:
4.2.2.24
]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KET34_05660
Enzymes [BR:
ppab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.24 rhamnogalacturonan exolyase
KET34_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
UPK47154
LinkDB
All DBs
Position
1257571..1259913
Genome browser
AA seq
780 aa
AA seq
DB search
MPLAAKMLSSALSVALLVAGTAGASGAAVSNGNSAAEAGLQSHKGGGPLKDIQLEYLDRG
LVAASTSEGVFLSWRLLGDEATGYSDKGLTGTDFNVYRDGKKIATVTDSTNYVDTAGKSS
SRYEVAAVSNKGKESKRSASVKPWANGYVDIPLQKPADGVTPVGEAFTYSANDMSVGDVD
GDGQYEFFVKWDPSNSKDVSQKGYTGKTYVDCYTLDGQLLYRIDLGVNIRSGAHYTQMLV
YDFDGDGKAEMMFKTAPGTKIIKYNKKGKVTSEKYITLPKQDRKAGYSNEDDYRLSADGY
YDHVVDMFKNWHKHEEVVKGNWPATLEEAFGIEKKYSYPLSQQDAESLADYFIDVYAPSR
SDKNELRKFEGFIVDGPEYVTVFEGESGKELETIPYEPGRQDDGLMWGDYAMARIEPANR
VDRFLAGVAYLDGKQPSAIFARGYYTRSTMVAYNWDGKKLKREWKVDSGWTPMKNPFNDG
PHGVEGTDPVYGSITTQGAHYFSVADVDGDGKQEIVYGSATIDHDGSVLYSSKDLMPAES
AAPGTIARLGHGDALHVADIDPDRPGLEIFMVHEGGPWAPYGYSLRDAKTGEVIYGGYTG
KDTGRGMVGDVDPTRRGLETWAVGLWTASGEKISDKAPGTNMNIRWAADMTTQIVDGAIN
VTPTIKDWNRGTLLTATGTLTNNYTKGTPSLVADIFGDWREEMLVRTEDSSAIRIYLSTE
KTDRKLYTLMHDAMYRVGIAGQNSGYNQPSYPSFYMASDIDWSKVTLPKFHTPKSGKGGK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgcagccaaaatgctgtcttcggcactaagcgtcgccttgctcgttgcagga
acagcgggtgcgagcggggctgcagtttccaatgggaacagtgcggctgaggccggcttg
cagtcacataagggaggtggtcctttgaaagacattcagctggagtatctggatcggggt
ctggtcgcggcgtctacttccgagggggtttttctcagttggagattgcttggtgacgag
gccacagggtatagcgataaaggtctgacaggtacggacttcaatgtatatcgtgatggc
aagaagattgctacggtcacggacagcaccaactatgtggataccgcaggcaaatcgtcc
tcccgttatgaagtggcagcggtaagcaacaagggaaaggaaagtaaacgcagtgcatcc
gtcaaaccttgggcgaacggctacgtcgatatccctttgcaaaaacctgccgatggtgtg
acacctgtgggagaagccttcacgtattctgcgaatgacatgagtgttggggatgtagat
ggggacggtcagtatgagttttttgtaaaatgggatccatcgaactccaaagatgtctcg
caaaaaggctacaccggtaaaacgtacgtggactgttacacactggacggacaattgttg
taccggatcgatctcggggtcaacatccgttcgggtgctcattatacacagatgctcgtt
tatgattttgacggggatggcaaggccgagatgatgttcaagaccgctccaggcaccaag
attatcaaatataacaaaaaaggaaaggtcacatccgagaaatacatcacccttccgaag
caggatcgtaaggcaggttactctaatgaagatgattaccgtttgagtgcagatggctat
tatgatcatgtggtggatatgttcaagaattggcataaacatgaagaggtcgtgaagggc
aactggcctgctacgttggaggaagcttttggaatcgagaaaaagtatagttatccattg
tctcagcaggatgctgagagcttggccgattactttatcgatgtgtatgcaccgagccgg
agtgacaagaatgagctgcggaagttcgaaggttttatcgtggatgggcctgagtatgta
acggtgttcgaaggagagtcaggcaaagagttggagaccattccttatgagccaggacgg
caggatgatggattgatgtggggcgattacgcaatggctcgtattgaaccggcgaaccgg
gtagatcgtttcctggcaggcgtggcatatctggacgggaagcaaccatcagcaatcttt
gctcgtgggtactatacacgttccaccatggtcgcctacaactgggatggcaaaaagctt
aagcgtgaatggaaagtggacagtggctggacaccgatgaagaacccattcaatgacggt
ccgcatggggtggagggtactgacccggtgtatggttccatcacaacgcaaggcgcgcac
tatttcagtgtcgctgatgtggatggagacggtaaacaggagattgtgtacggctctgcc
accattgatcatgatggcagtgtgctgtacagctccaaggacctgatgcctgcggagagt
gctgcaccgggaacgattgcgcgtctgggtcatggggatgcgcttcatgtagcggatatt
gatccggatcgtccgggactggagatctttatggtgcatgagggtggtccttgggcgcca
tacggatattccctgcgggatgcgaagaccggggaagtgatctatggcggatacacgggc
aaagataccggacgcggcatggttggtgatgtggacccgacccgccgtgggttggagaca
tgggccgtgggattgtggacagccagcggtgagaaaataagcgataaagcccctggtacc
aatatgaacattcgctgggcggccgatatgacaactcaaattgtggacggggccatcaat
gtcacgcctacgatcaaggattggaatcggggcacgctgctgaccgcaaccggaacgttg
accaacaattataccaaaggtacgccatctctcgtcgcagatatcttcggggattggcgg
gaagagatgctggtgagaaccgaggacagctcggcaattcgcatctacctgagcaccgag
aagaccgaccgtaaactgtacacgctgatgcatgacgcgatgtatcgtgtcggcattgct
ggacagaacagtggatacaatcaaccgtcctatccgtccttctacatggcatcggatatc
gactggtcgaaggttacactgcccaagttccatacgcccaagtcgggcaaaggtggaaag
tga
DBGET
integrated database retrieval system
