Paenibacillus pabuli: KET34_05955
Help
Entry
KET34_05955 CDS
T09669
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppab03032
]
KET34_05955
03036 Chromosome and associated proteins [BR:
ppab03036
]
KET34_05955
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_05955
DNA replication proteins [BR:
ppab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KET34_05955
Chromosome and associated proteins [BR:
ppab03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KET34_05955
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KET34_05955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Drf_DAD
DUF2267
DUF937
Motif
Other DBs
NCBI-ProteinID:
UPK45044
LinkDB
All DBs
Position
complement(1341933..1342205)
Genome browser
AA seq
90 aa
AA seq
DB search
MDKEQLITEVAKNGGFSKKNAEKAVTVVLDSILEALKEGKEVQLVGFGKFEVRNREARMG
KSRRTGKEIQLPAGKVPVFTAGLTMKEALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaacaattgatcacagaagtagccaaaaacggcggattctccaaaaagaat
gctgaaaaggctgtaaccgttgtgcttgattcaattttggaagcattgaaagaaggcaaa
gaggttcaactggttggattcggcaaattcgaagtgcgtaatcgtgaagcacgtatgggt
aaaagccgccgaactggtaaggaaattcagcttccagcaggtaaggttcccgtattcaca
gcagggttaacgatgaaagaagctttaaactaa
DBGET
integrated database retrieval system
