Paenibacillus pabuli: KET34_11680
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Entry
KET34_11680 CDS
T09669
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppab03009
]
KET34_11680
Enzymes [BR:
ppab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KET34_11680
Ribosome biogenesis [BR:
ppab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KET34_11680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Motif
Other DBs
NCBI-ProteinID:
UPK46057
LinkDB
All DBs
Position
2486033..2486779
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AA seq
248 aa
AA seq
DB search
MSGKGKQTLRLDKILSHMGVGSRSELKKMVKQGRIRVDGKPVKDSGVQVNPDVNVIEADG
ERIVYREMIYLMLHKPPGVVSATEDNRDKTVIDLLRKEDRIFDPFPVGRLDKDTEGLLIL
TNDGPLAHDLLSPRKHVPKTYEARVLGNVDEEDIERFKAGIQLDDGYETLPAELTVLQRE
ETEEGVFSSISLIIHEGKFHQVKRMFQAVGKRVVYLKRVAMGDLELDADLAIGSYRELTA
DELELLRK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaaggcaaacaaacgctgcgtctggataaaatattaagccatatgggtgtg
gggtcacgaagtgaactcaaaaagatggtgaagcagggcagaatccgtgtggatgggaaa
ccggtgaaagacagcggggtgcaggtcaaccccgatgtaaacgttattgaagctgacgga
gagcgaatcgtatatcgggaaatgatctacctgatgctgcacaaaccacctggcgtagtg
tcggcaactgaagataatcgggataaaacggtgattgatctgctgcgtaaagaggatcgt
attttcgatccgttccctgtgggacgactcgacaaagacacggagggtttgctgatttta
accaatgatgggccacttgcccacgatctgttatccccgcgtaaacatgtacccaagacg
tatgaagctcgtgtccttgggaacgttgatgaagaagatattgaacggttcaaagccggt
attcagctggatgacggatatgagacgttgcctgcggaactgactgtgcttcagcgtgag
gaaacggaagaaggcgtgttttcttccatttcattgatcatacatgaaggcaagttccac
caggtgaaaagaatgttccaggccgtaggcaagcgcgtggtttatttaaaacgtgttgcc
atgggtgatctggagctggatgccgatctggcaatcggcagctaccgcgagctaaccgca
gacgagttagaacttctgcggaagtaa
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