Paenibacillus pabuli: KET34_12860
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Entry
KET34_12860 CDS
T09669
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppab03016
]
KET34_12860 (truB)
Enzymes [BR:
ppab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KET34_12860 (truB)
Transfer RNA biogenesis [BR:
ppab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KET34_12860 (truB)
Prokaryotic type
KET34_12860 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UPK46268
LinkDB
All DBs
Position
2768051..2768974
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AA seq
307 aa
AA seq
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MVKPFEGVLPVYKPAGFTSHDVVAKMRRILKMKRIGHTGTLDPQVTGVLPLCLGRATRVV
EYMQELPKEYLATLRLGLSTDTEDMTGEVIERSETAVEVTKEQVQQVLEKFLGTISQVPP
MYSAVKVDGKRLYELAREGKTVERKSREVTIYELELTGMENQGDTTDISFRALCSKGTYI
RTLCVDIGRELGYPSTMLQLERTMSAGISAEHCLRFKEVEQRMIDGTLAEVLIPVDEAIS
SIPAHTVGSDQAKGALQGQKLSARLLEPPADQPGLLRLYDQDGTFLGIFERDEMKATVRA
VKVFLPE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagccatttgaaggcgtacttccagtgtacaaaccagcgggatttacttctcat
gatgttgtggccaaaatgcgtcgcattctcaaaatgaaacgtattggtcacacaggcaca
ttggaccctcaggttactggcgtacttccgctttgtcttgggcgggcaacacgtgtggtg
gagtacatgcaggagctccccaaggaatacctggcaaccctgcgactgggtctttctact
gacacggaggatatgactggtgaggttattgagcggtcggagactgctgttgaggtgaca
aaggaacaggttcagcaggtgctggagaaattcctgggtaccatctctcaagtcccacct
atgtattctgcggttaaagtggatggaaaacgtctctatgaacttgctcgtgaaggtaaa
acggtagagcgtaagagtcgcgaagttacgatctatgagctggaattgacaggtatggag
aatcaaggcgatactacggatatatcatttcgtgctttatgctccaaagggacgtacatt
cgaacgttatgtgtggatattggcagagaattggggtacccgtccaccatgctgcagctg
gagcgcacgatgtcggccggaatttccgcagaacattgccttcgctttaaagaagtggaa
caacgcatgatcgatggaacattagctgaagtgctgattccggtggatgaagccatctct
tccattccggcacatacggtgggttcggatcaagccaagggagcgcttcaaggccagaaa
ttgtcggcgcgtttgctcgaaccgcctgcagatcaaccaggtctattgcggttatatgat
caggatgggacgtttctgggcatatttgaacgggatgaaatgaaagcaacggtgagagct
gttaaagtctttttgccggaataa
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