Paenibacillus pabuli: KET34_12875
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Entry
KET34_12875 CDS
T09669
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KET34_12875 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppab03019
]
KET34_12875 (pnp)
03016 Transfer RNA biogenesis [BR:
ppab03016
]
KET34_12875 (pnp)
Enzymes [BR:
ppab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KET34_12875 (pnp)
Messenger RNA biogenesis [BR:
ppab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KET34_12875 (pnp)
Transfer RNA biogenesis [BR:
ppab03016
]
Prokaryotic type
tRNA degradation factors
KET34_12875 (pnp)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UPK46270
LinkDB
All DBs
Position
2770661..2772763
Genome browser
AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRKLTLETGRLAKQANAAVKVTYGDTVVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQVLNIVMSVDQD
CEPQIAAMIGTSAALSISDVPFSGPIGGVKVGRIDGEFIINPTIAQLEVSEIELVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHDEIKNIVAVIEQLVQVAGKEKMAVKLHAVNAEVN
SNVREFASARLVEAVKIAEKHARQDAIDVVNDETVAHFEEKYIETPELLKDVKEVLHDIV
KEEVRRLITHDKVRPDGRGLAEIRPIECDTSLLPRTHGSGLFTRGQTQALSICTLGALGD
VQILDGISLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHVSILSDI
QGMEDHLGDMDFKVAGTPDGVTAIQMDIKIDGIDRQILSEALAQAKEGRMHILSKMTEVM
KTPREQLSQYAPKITTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNDKAKSIIEGIVREVLVGEIYVGKVKRVEKFGAFVEVLPNKEGLVHISQLSTERVAK
VEDVVAIGDSITVKVTEIDPQGRINLSRKAVLTAEAPAQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgtgttgaaatgcagcttggtggaagaaagcttacgcttgaaacagggcgt
ttggccaagcaggctaatgctgccgttaaggtaacgtacggggataccgttgtattgtgt
accgtgacagcatcaagtgagcctaaagatctggactttttcccattaacggtaaactat
gaagaaagattgtatgccgttggtaaaattccaggtggatttattaaacgtgaaggcaga
ccgagtgagaaagcgattctggcgagccgtttgacagaccgtccaattcgtcctttgttc
ccggaaggtttccggaatgatgtacaagttctgaatattgttatgagtgtggatcaggac
tgcgaaccgcaaattgctgccatgatcggtacatcggctgcactgagcatttcggatgtt
ccatttagcggaccgattggtggcgtaaaagttgggcgtattgatggcgaattcatcatt
aacccaacgattgcacagcttgaggtaagtgagattgaactcgttgttgcaggaaccaaa
gatgccatcatgatggttgaagcggaagcgaacgaagttccggaagaagtaatgcttgag
gcaattatgtttggacatgacgagatcaaaaatattgtggcagtcattgaacaacttgta
caagtggctggtaaagaaaaaatggctgtaaaattacatgccgttaatgcagaagttaac
agcaatgttcgtgagttcgccagtgctcgtctggttgaagctgttaaaattgctgagaaa
catgcccgtcaggacgcaattgatgtcgtgaatgacgaaaccgttgctcacttcgaagag
aagtatattgaaactcctgaactgcttaaagatgtgaaagaagtgctgcacgatatcgtg
aaagaagaagtgcgtcgtcttatcacacatgataaagttcgcccggatggacgtggactc
gctgagatccgtccaattgaatgtgatacttccctgcttccacgtactcacggttcaggt
ctgttcactcgtggtcaaacacaagcgctcagcatttgtacacttggtgcactgggtgat
gttcagattttggatggaatcagtcttgaagaaacaaaacgcttcatgcatcactacaac
ttcccgccgttcagcgtaggtgaggctcggccattgcgtgctccaggccgtcgcgaaatc
ggacatggtgctctgggagagcgtgctctttccaaagtcattccttccgaaacagacttc
ccatatacgattcgtttggtatccgaagtgctggaatccaacggatcaacttcccaggca
agtatctgtgccagcacattggctatgatggatgcaggtgtaccaattaaagctccagta
gcaggtgtagctatgggtctcatcaaagacggagaacatgtatccattctgagtgatatt
caaggtatggaagatcacctcggtgacatggacttcaaagtagcaggaacgcctgacggt
gtaaccgctattcaaatggacatcaaaattgatggcattgatcgtcaaattttgtctgaa
gcattggctcaagccaaagaaggtcgtatgcatatcttgagcaaaatgaccgaagtgatg
aaaactccgcgtgagcagttgtcacaatatgcccctaaaattacaaccatgcacatcaac
ccggacaaaatccgtgatgttatcggtgcaggtggtaaaattatcaataaaatcatcgaa
gaaaccggtgttaaaattgatattgaacaggatggccgtgtctttatcgcttcttccaac
caagagatgaatgataaagccaaatcgatcatcgaaggtatcgttcgtgaagttctggtt
ggcgagatttatgtaggtaaagtgaaacgtgttgagaagtttggtgcattcgttgaagtg
ctgccgaacaaagaaggtctggttcacatctcacaattgtccacagagcgtgtggctaaa
gtggaagatgttgttgctattggtgattccattacggtaaaagtaacggaaattgaccca
caaggccggatcaacttgtcccgcaaagccgtattgactgccgaagctccggctcaatca
tag
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