KEGG   Paenibacillus pabuli: KET34_13000
Entry
KET34_13000       CDS       T09669                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ppab  Paenibacillus pabuli
Pathway
ppab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KET34_13000 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppab03019]
    KET34_13000 (rny)
Messenger RNA biogenesis [BR:ppab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KET34_13000 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2
Other DBs
NCBI-ProteinID: UPK46293
LinkDB
Position
2798996..2800540
AA seq 514 aa
MPTTAIMIVLVVAALFIGFGVGYFIRKSLAEAKISSAEEAAVQIVENAKKEAEALKKETV
LEAKDEIHRIRAEAEKDTRERRNEIQRQERRLLQKEESLDKKLESLERKEEQVANKEKRI
DETQQQIEMIYKNQVTELERISNLTMEDARSIILSNVEQEVRHETAQMIKDIEQQAKEEA
DKKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQA
TFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAGELGEDVTLARRAGL
LHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADAL
SAARPGARRETLETYIKRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPEKIDDAEAFR
LARDITKMIENELDYPGHIKVTVIRETRAVEYAK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgccaactactgcaatcatgatcgttctcgttgttgccgcgctattcattgggttcgga
gtaggatattttattcgcaaatctcttgcagaagctaagatctccagtgcggaagaagct
gccgtacaaatcgtggagaacgcgaagaaagaggcagaagcactgaagaaagaaacggtg
ctggaagcgaaggatgaaattcatcgcattcgcgccgaagctgaaaaagacactcgtgaa
cgtcggaacgaaattcaacgacaagaaagacgattgttgcaaaaagaagagtcgctggat
aaaaaattggaatcactcgaacgcaaagaagagcaagtggctaacaaagagaaacgaatt
gatgagacacagcagcaaatcgagatgatctacaaaaaccaggtgacggagctggagcgc
atatccaacctcaccatggaagacgcacgcagtatcatactgtccaacgtagaacaggaa
gttcgtcatgagacggctcaaatgatcaaggacattgaacagcaagcgaaggaagaagcg
gacaaaaagtcccgcgagattattacactcgctatccaacgctgtgcggctgatcacgtg
gcggagacgacggtatccgttgttactttgccaaatgaagaaatgaaaggccggattatc
ggtcgtgaaggacgtaacatccgtgcgcttgaaacccttaccgggattgacctcattatc
gatgatacgccagaagctgttattctgtcgggctttgacccgattcgccgtgaaatcgcc
cgtactgccctcgaaaaactggtggctgatggacgtattcacccggcacggattgaagag
atggtggagaaatcccgcaaagaagtggatgagcgtatccgtgaatacggtgagcaagct
acctttgaagtgggcgtgcatggtctgcatccggacttgattaaaattctgggccggttg
aagttccgtacaagctatggtcaaaacgtcttgaaacattcgatggaagtcgcttatctg
gctggattgatggctggcgaactcggagaagacgtaaccctggcaagacgtgcaggtcta
ttgcatgacatcggtaaagcgctggatcacgaagtggaaggatcacacgtcgaaatcggc
gtggaactagcgaagaaatacaaagaacatccggttgtaatcaacagtatcgcgtcccat
cacggggattgcgaagcgacttcggttattgccatgttggttggcgcagcagatgcgctc
tccgcagcaagaccaggcgcacgccgcgaaacgctggaaacgtatatcaagcgactggag
aagctggaagagatttcggaatcgttcgaaggtgtcgagaaatcgtacgctattcaggcc
ggacgcgaagttcgtgttatggtacagcctgagaaaatcgacgatgctgaagccttccgc
ctcgcgcgtgacatcacgaagatgatcgagaatgaactcgattatccgggtcacatcaaa
gtcaccgtcatccgggaaacccgtgcggttgaatacgcaaaatag

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