Paenibacillus pabuli: KET34_16360
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Entry
KET34_16360 CDS
T09669
Name
(GenBank) S-layer homology domain-containing protein
Organism
ppab
Paenibacillus pabuli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Pect-lyase_RHGA_epim
CBM9_1
End_N_terminal
Motif
Other DBs
NCBI-ProteinID:
UPK46891
LinkDB
All DBs
Position
3591163..3596718
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AA seq
1851 aa
AA seq
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MNKQLRSSVRCTISVLLIIVMLCSGLYITPATTHAAEEREDITEQGDVQLNDVSSDSVSI
TLGETPVEQGITARPGDGPPAGLQVGTFDGKAYWKTNQTVNPTNPADNILYFYFNVADEY
LFENTDQDVFVTVEYYDNDSGAMVLQYDSKQSSFKDAPLFRYENTGTWKTHTFKLSDANF
GNRTHEADFRIGVSGAGAPANNPELHLTKVTVHKQPQQQTGAQTKVYDTEFPTADIVIAD
RSVTDYGAIGDGISDDTQAFKEALAIAGNQGGGVVFVPSGTYKLTGELVIPTGVTLRGDW
GNPDEHAGLVKGAILAVYGGKGQANGNSFIKLEPSSGVTHLSIWYPEQNMNNPVAYPWTM
EQLPGDSATVKNVTLVNAYKGIKIGPEWNELHYVKGVYGTTLKTGIFLDFTTDIGRLEEL
HLSPDVWASSGLPGAPERSQLREYMIQQSEGIVMGRSDWEYMSNIHISGYKTGIRITTRT
GSLETANAQLYKIQIDDCNVALKIEGVNDYGLLVTDSQFEASAGPNPVAIYATEGFHSIA
QFNSVTVGGEPKHAVVNEGRGTLSFESSSFENWGEGSGDYAIVARSGSLILGSSTFAKQD
RHLLLQGDVATINAIHSGHEGNLAVNDESTSAELNIHQEEDLVLETIPDVPSVDIAVQPK
PRTRELFNVVSQPYLADNTGGADSSQAIQQALNDAKAAGGGTVYMPAGIYRVEQALVIPT
GVELRGNYDVPHHTIGNGTVIFTNYGENDPDADAFIQLEEAAGLRGLSVYYDQQTWSDSH
PVKPYAWTVQGQGKNVYLIDTTLVNPYQAVDFGTHDTSGHYIDYVAGSPLKEGIYLGGGS
DGGYMRNVQFNPHYYGRNNYPNHPSNDEEFNQIWNYQKENLDAFRIGDVTNQVIFNTFVY
GSKYGIHFEEQNGRGPEAVVIGHGTDGSKKGAVLQHAGTAGLSFINTELVSMSTTDKVYV
EVGPDFGSKAVFFNTSMWGDTTRSFDIHGGDIHIQQGNFTNVGEIGINAIGGDITLYNSY
FQQPRTNHVVAGPNVTKMVISNNLFNGGFQIENEAPPGKVTGTNLFPLALKLNQLGYDPS
RPGEPGSTLTLTNVAGAALLKGQIELIEPSVYHAMFKPVRFEGLGIGKSMDVALPYISSD
LLKFRVTLENGFRYDTSVKLSQSFAAKKDAVGTLPSIEVSSPEHYNSVGGSWAGPNDLSI
QTKASWDAENLILKVDVKDDIHHQSHTNGDIWQGDSLQLGIDLGKEDGAASKQVNELGFA
LNQEGVITKWRWRAPEGVATGLLESASANITRDETTHITHYEITLPFEALHQEGYSFQPD
KPIGFALLVNENDGEGRSGFMEFNGGIGTSKDARLFGNLYLLTGDYVTLLEQSAEASVRT
AEQKKDVTSIDTAANFVTLLPGGTLKSSLLVRLAALTSGSNPNPGGPNPQPGSGSGSTPS
AGGGSTTGGKNEATPAASGAAMPLKPKLDKAAALATAELTNKMMEDAFNRITPDQDGKKK
LIVDIESVDGAEGYALTLPSSFLQETPSIHWLEIRTAWGVLLVPSNLLANTQGTIGDRIT
LVLSRADRSAWSAKVKSDLGERPAISLSVISDGKSVAWQNSITPITVSLPYQPNVTELLD
PEKLAIRRIADDGQMISIPNGKFNQKSEQIIFKTRQNGVYAITQDIRTFKDIQQLSWARH
AIEVLVSKGVIHGMSEAEYQPQSMIRRADFVTLLTNALELQPDQGTKVERFADVPEHVYY
EQSVNTARTLGVIQGAGADQFSPASPITREEAAVMVYRAMQVIGMQSLPEDEPGLGDYKD
THLIKAYARDAIDSLTRSAIMEGSNGSFHPEDTLTRAETAVLLYRLYNRLP
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaacaattaaggtcaagtgtcaggtgtaccatttcagtgctgttgattattgtc
atgctatgttcagggctatatattacaccagcaaccacacacgcggcagaagagagggaa
gatattactgaacagggagacgttcaactaaacgatgtgtcatctgattcggtaagtatt
acgctcggagaaactcctgttgagcaaggtataactgctcgtcccggcgatggacctcca
gcaggtcttcaagtggggacatttgacggcaaggcttattggaaaaccaatcagacggtg
aatccaacgaatccagccgataacatcctgtatttttacttcaacgttgcggatgaatat
ttgtttgaaaatacggatcaggacgtgttcgtaactgttgaatattacgataacgatagt
ggagccatggttcttcaatacgattcgaagcaatccagtttcaaggatgccccgttgttc
cggtatgaaaacacgggaacgtggaagacccatactttcaagctgagtgatgccaatttc
ggtaaccgcacgcatgaagcggatttccgaatcggggttagcggcgcaggggcaccagcc
aacaatccggaacttcatctcaccaaagtaaccgtccataagcagcctcagcagcagaca
ggtgctcagaccaaggtctatgatacggaatttcctacggcagatatcgtcattgcagat
cggagcgtaacggattatggagcaataggggatggaatttcagacgatactcaagcgttc
aaggaagcgctggcaatagcgggaaatcaaggcggcggggttgtgttcgtgccatccgga
acctacaaattaaccggagagctggttattccaacaggcgttacgcttcgcggagattgg
gggaatcccgatgagcatgcggggctagtcaaaggagcgatccttgctgtatatggtggc
aaaggtcaagctaacgggaacagcttcattaagctggagccttccagtggggtaacacac
ttgtctatctggtatcccgaacagaatatgaataatccggtggcctatccatggacgatg
gagcagcttccgggtgacagtgctacggtgaaaaatgtaacactcgtcaatgcgtacaag
gggattaagattggtccggaatggaacgaacttcattatgtgaagggtgtatacggcact
acactgaaaacgggtatttttctggatttcacaacagacattgggcgactggaagagctt
cacctgtccccggatgtatgggcaagttcaggcttgccaggagcacctgaacggtctcaa
ctgcgtgaatatatgatacaacagtcagaaggtatcgtaatggggcgctcggattgggag
tacatgtcgaatattcatatttcgggttataagacaggcatacgaattacgacaagaaca
ggaagcctcgaaacagccaatgcgcagctgtacaagatccagatcgacgattgcaacgta
gcgctgaagattgaaggtgtcaatgattatggattgctggtgacggacagtcaattcgaa
gcgagtgctggtccgaatcctgttgccatttatgcaacggaaggttttcactccattgcc
cagtttaacagtgttacggtgggcggtgagcccaaacatgcggttgtgaatgaagggcgt
ggaacgctgtcctttgagagcagttctttcgagaattggggtgaaggaagcggagactat
gccatagttgccagaagtggttcgcttatactgggtagttctaccttcgccaaacaggat
cggcacctgcttcttcagggagatgtggctacaatcaatgccatacattccggacacgaa
ggcaaccttgcagtgaacgatgaaagtacctcggcggaactgaacatccatcaggaagaa
gatttggtgttggaaactatccccgatgttccttcagtggatattgctgtgcagcccaag
ccgcgtactcgcgaattgtttaacgtagtgagccagccctatttggctgataacacagga
ggtgctgattcatcccaggcgatacaacaagcattaaatgatgcgaaggctgcaggtgga
ggtacggtctatatgccggctggcatatatcgcgttgagcaggcgttggtgattcctact
ggtgtggaattgcgggggaattatgatgtacctcaccacaccatcggaaacggaacggta
attttcacgaactatggagaaaacgacccagatgccgatgccttcattcagctggaggaa
gcagcgggattacgaggcttatccgtctattacgatcaacaaacatggtcggattcccat
ccggtgaagccttatgcatggactgtgcaaggtcaagggaaaaacgtatacctgatcgat
acaaccttggttaatccctatcaggctgtcgacttcggcacccatgatacaagtggtcat
tatatcgattatgtagcgggatcaccgctcaaggaaggcatatatcttggtggggggtca
gacggaggatacatgcggaatgtgcagttcaatccgcattattatggccggaacaattat
ccgaatcatccatcgaatgatgaagaatttaatcaaatttggaattatcaaaaagagaat
ctggacgccttccgtattggggatgttaccaatcaggttattttcaatacatttgtatac
ggatcaaagtacggtattcattttgaagaacagaatggaagagggcctgaagccgtcgtt
attggtcatggcacggatggcagcaaaaagggagccgtattgcaacatgcgggaacagca
ggtctttcgtttatcaacacagagcttgtttccatgagtacaacagacaaggtatacgtg
gaggttgggccagactttggttccaaagcggtgttctttaatacgtccatgtggggagac
acaacaaggtcttttgatattcatggaggagatatccacatacagcagggaaacttcacc
aacgttggtgaaatcggcattaatgcaatcggtggggatattaccctctacaattcctat
tttcaacagcctcgtacaaatcatgtggttgcaggtccaaacgtaacgaagatggtgata
tccaacaacctgtttaatggtggttttcagattgagaatgaagcgcctcctggaaaagtg
acgggtaccaatctgtttcctttggcactcaaactgaaccagcttggatatgatccatcc
agacctggtgaacctggaagcacactgactttgacgaatgttgcaggtgcagctttgctg
aaagggcagattgaactgattgaaccgagtgtgtatcatgcgatgtttaagcccgtgcga
tttgaggggttgggcattggaaaaagcatggatgtggcgcttccttatatatcaagtgac
ttgctcaaattcagagtaacgcttgagaacgggttccgttatgacacttcagtcaagctg
tcacaatcctttgctgccaagaaggatgctgtaggaacgttgccatccattgaggtgtcc
agtccggagcattacaacagcgtcggtggaagctgggcaggcccgaatgacctcagcatt
caaactaaagcaagttgggatgcggaaaatctgattctcaaggtggacgtcaaggatgac
attcaccatcaatcccataccaatggcgatatatggcagggggacagtctacagctcggt
attgatcttggcaaagaggatggtgcggccagcaaacaggtgaatgagcttggttttgca
ctgaatcaggaaggtgtcatcacgaaatggagatggcgagccccggaaggggttgctaca
ggattattggaatccgcttcagcaaatattacccgggacgaaacgacccatattactcat
tatgaaattacgctgccttttgaagcgcttcatcaggaaggatattcattccaacctgac
aaacctatcggttttgcattgcttgtcaacgaaaatgatggcgaaggacgatcaggcttt
atggagtttaatggtgggatcggtacaagtaaagatgcacgattattcggaaacttgtat
ttgcttacgggtgattacgtgacattgttggagcaatcggctgaggcgagtgttcgtact
gcggagcaaaagaaagatgttacctctatagatacagcggccaacttcgtcactctgctg
ccgggcggtacgttgaagtcctcattacttgtaagactcgctgctcttacatcaggttcc
aatccgaatcccgggggacccaatccacagccaggctcgggttctggttcgacgccaagt
gctggagggggctctacgacaggaggaaaaaatgaagcaacacccgccgcttctggtgct
gcaatgccgcttaagcccaagctggataaagctgctgcattggcaacagccgagctcacc
aacaagatgatggaggatgcattcaaccgcatcacccctgatcaggacgggaaaaagaag
ctgattgtagacatcgaatccgtggatggtgctgaagggtatgctcttacacttccatcc
agctttttgcaggaaacaccatctatccattggctggagattcgaacagcatggggagtg
ctgctggttccgagcaatttgctggccaatacccaaggaacgattggagatcgtattacc
ctggtattaagcagggctgaccgaagcgcttggagtgctaaggtgaaatcagacttagga
gagcggcctgcaatttcattatctgtgatatcggatggcaaatccgttgcatggcaaaat
tccataacgccaatcacagtaagtttaccttatcagcctaatgtaactgaactgctggac
ccggaaaaactcgcaatacgacgtatcgcggatgacgggcaaatgatctccattccaaat
gggaagttcaatcaaaaatcggaacaaatcattttcaaaacacggcaaaacggagtttac
gcaattactcaggatattcgaacatttaaggatatacagcagctatcatgggcccgccat
gccatcgaagttctggtgtccaaaggggttattcatggaatgtcagaggcagaatatcag
cctcaatccatgatccgccgagcggatttcgtaaccctccttaccaatgccttggaatta
caacctgatcagggaaccaaggtggaacgctttgccgatgtaccagagcatgtttattac
gaacagtccgtgaataccgcaagaacgctgggcgtcattcaaggggcaggcgccgatcaa
ttctcgccagcctctccaattacccgggaagaagcagcggttatggtctaccgggctatg
caagtgatcgggatgcagtctcttccagaagatgaacccggtttgggtgactataaagat
actcatttgattaaggcatatgcccgcgatgccattgattcattaaccagatcagccatt
atggaggggagtaatggcagcttccatccggaagatacactgactcgtgctgagaccgca
gtgctgctgtatcgtttatacaaccgtttgccttaa
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integrated database retrieval system
