Paenibacillus pabuli: KET34_16675
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Entry
KET34_16675 CDS
T09669
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03420
Nucleotide excision repair
ppab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KET34_16675
03430 Mismatch repair
KET34_16675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_16675
Enzymes [BR:
ppab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KET34_16675
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KET34_16675
MMR (mismatch excision repair)
Other MMR factors
KET34_16675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
SLFN-g3_helicase
AAA_30
DEAD
nSTAND3
AAA_16
NACHT
MC2
Rop
JIP_LZII
PRP1_N
Motif
Other DBs
NCBI-ProteinID:
UPK46949
LinkDB
All DBs
Position
3667496..3669925
Genome browser
AA seq
809 aa
AA seq
DB search
METKDWRMEQERLESVRNKLQVRIAELEPEVAGMRDQATEIRKRFWEEVTINTSTHEDFE
ETFYTINQQSAVLAERERGHMRLTQQWNNMKRLLPSPYFGRIDFHEKGLEFSEQIYIGVS
SFVDEDGLNFLIYDWRTPIASMYYDSSPGAASYVTPIGQIDGTMELKRQFQIHNGQIRNM
FDANETIGDQMLQQVLGKGADSQMKSIVATIQKEQNAIIRNDASRMLIVQGAAGSGKTSA
ALQRVAYLLYKHRQTISADQIVLFSPNPMFGSYISTVLPELGEDNMQQTTFQQFLDYWLG
SSLRPEDIFDQIEYVLTAHEAPGYEARLQGIEYKASDAFLQALQNYGNWLGQEGMRFNSI
RFRNRNLITKEQMRAKFYGYDRSLPLLNRVVLLQEWLLKELATLERMEREEPWVQEELNY
LDNDQYADIFEVLHKDKEVFDIAEQYAQIREKISNKRREDEGDFDFAQKEEELLSRKIVK
ERFSPLRKSIKKFSFVDIKGIYAELFVDEAAYREKTNAADMPPLWPEICEQTRESLLRNE
LFHEDATPYLYVKELIEGVRTNTEIKYVFVDEGQDYSTFQYEYLKKLFPRARMTVLGDFG
QAIFTQATHLAAADSPLVRLYGEAETSLFSLVRSYRSTKEIVEFTRAMLPEGDEIVPFER
KGLKPQLKKSNDREKLDAQMVADIAALRAEGFDSIAIITKTAAECQKACESLQNQGGEAL
QLVTKETFNFEKGVMVIPVYLAKGVEFDAVLVYDASSGAYGRDNERKLLYTACTRAMHRL
HLYTTGDWSPFVQALPGELYEEWNAHTSE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaggattggcgtatggaacaggagcggctggagtctgtaagaaacaaactg
caggtcagaattgcagaattggagccagaggttgcgggaatgcgtgaccaggcaacggaa
attcgcaagcgcttttgggaagaggttacgatcaacacaagcacccatgaagatttcgaa
gagaccttctacaccataaaccagcagtctgcagtattggccgagcgggaacgtggtcac
atgcggttgacgcagcaatggaataacatgaaacgcttgctcccatccccttattttgga
cgcattgacttccatgagaaaggtcttgaattcagcgagcagatctatatcggggtatcc
tcttttgtcgacgaagacgggttgaactttctgatctatgattggcgtacaccgatcgcg
agcatgtactacgactcttctcccggagcagcatcctatgtgacaccgatcggacaaatc
gatggcacaatggagctcaaacggcaatttcagatccataacggacaaatccgcaacatg
ttcgatgcgaacgaaacgatcggagaccaaatgttgcagcaagtgctcggcaaaggtgca
gattcacaaatgaaaagtatcgtggcaactattcagaaggaacaaaacgccatcattcgt
aatgatgcaagtcgaatgcttatcgtacagggagcagccggtagtggtaaaacttccgca
gccttgcagcgggtggcgtacttattatacaaacatcgccagacgatcagcgctgatcaa
atcgttcttttctcacccaatccaatgtttggcagttatatttccactgttcttccggag
cttggtgaagataatatgcagcagaccacttttcaacaatttctcgactattggcttgga
tcttcgctgcgtccggaggatatctttgatcagattgaatatgtactgactgcgcatgaa
gctccaggctatgaggctcggcttcaagggatcgaatataaagcttccgatgcttttctg
caagccttgcagaactatggaaattggttgggacaggaaggcatgcgattcaacagtatt
cggtttcggaaccgtaatttgattactaaggagcaaatgagagccaaattttacggttat
gatcgttccttgcccttgttaaatcgcgttgtactcttgcaggaatggctgctgaaagaa
ctggctaccctggaacgcatggaacgtgaagaaccgtgggtacaggaagaattgaattat
ctcgacaacgatcagtatgcggatatcttcgaagtgcttcataaagacaaggaagtattc
gatatcgcggaacaatacgcccaaattcgtgagaaaataagcaacaagcgtcgggaagat
gaaggtgactttgactttgctcagaaagaggaggagttgctcagccgtaagatcgtgaag
gaacgttttagcccactacgaaaaagtattaagaaattctcgtttgttgatatcaaaggt
atatatgctgaattgtttgttgacgaagctgcttatcgagagaaaacgaatgctgcggat
atgccgccgctatggcctgagatatgcgagcaaaccagagaaagcctgctgcggaacgag
ttgttccatgaggatgcgactccctatttgtatgtaaaagaactgattgaaggtgttcgg
acgaacacagaaatcaagtatgtcttcgttgatgagggtcaggattattcaacatttcaa
tatgaatatctcaaaaaactgtttccccgagcccgtatgaccgtgctcggcgatttcggg
caagcgatcttcacgcaggctacccatttggccgcagctgattcaccgctggtccgtctt
tacggtgaagccgaaacaagtcttttctccctagtacgtagttatcgctctacgaaggag
atcgttgagtttacaagagcgatgcttccagaaggagatgaaattgtaccatttgaaaga
aaaggcctaaagcctcagttgaagaaaagcaatgatagagaaaagctggatgcacaaatg
gtcgcagatatcgctgcgctaagagccgagggctttgattccatcgcgatcattacgaag
acggccgccgaatgtcaaaaggcttgtgaatcattacagaatcaaggaggcgaagctttg
caactcgttacgaaggagacgttcaatttcgaaaaaggtgtgatggtcattcctgtttat
ctcgccaagggtgttgagttcgatgcagttttggtctatgatgcctcgtccggagcttat
ggccgagacaatgaacgaaagcttctttatacggcgtgtacgcgggctatgcatcgcctt
catctgtatacgacgggtgattggtcgccttttgtgcaagctttgccaggggagttgtac
gaggaatggaacgctcatacatcggagtga
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