Paenibacillus pabuli: KET34_22645
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Entry
KET34_22645 CDS
T09669
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab00300
Lysine biosynthesis
ppab00470
D-Amino acid metabolism
ppab01100
Metabolic pathways
ppab01110
Biosynthesis of secondary metabolites
ppab01120
Microbial metabolism in diverse environments
ppab01230
Biosynthesis of amino acids
Module
ppab_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
ppab_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KET34_22645 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KET34_22645 (lysA)
Enzymes [BR:
ppab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KET34_22645 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UPK42010
LinkDB
All DBs
Position
complement(5022014..5023345)
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AA seq
443 aa
AA seq
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MYLHGTSKINAQGHLEIGGVDTTDLKEQFGTPLYVVDEQLVRERCREYMEAFRASGLGFQ
VAYASKAFCVMAMCALAAEEGLSLDVVSDGELFTALQAGFPAERIHFHGNNKTLEEIEMA
LDAEIGCFVVDNFNELHLLQAVAADKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGTAFEAIELASKQSNLVLLGVHSHIGSQIFEVEGFQMAVQRVAEFAANVYERLNVAF
KVVNLGGGFGIRYIDGDTPLEVSQYVKAITDAVKNHFAQIGYAVPEIWVEPGRSIVGEAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANEAAQETVSVAGKC
CESGDMLIWDLDLPKVQSGDLLAVACTGAYNYSMASNYNRIRRPAVVFVKDGQGDVVVRR
ETYQDIIQNDLVPERIAKQPVTR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacatggtacaagtaaaataaatgcacagggccatctcgaaattggtggcgta
gatacaacggatttgaaggaacaatttggaactccactgtacgttgtggacgagcaattg
gttcgcgagcgttgcagagagtacatggaagcatttcgcgcttccggccttgggtttcag
gttgcttatgcaagtaaagcgttctgcgtgatggccatgtgtgctcttgcagccgaagaa
ggactttccctggacgtcgtatccgatggtgaattgttcacggccctgcaagcaggtttc
ccggcagagcgcattcacttccatggcaacaacaaaacgttggaagagattgaaatggcg
cttgatgcagagattggctgtttcgttgtggataacttcaatgagcttcacttgctgcaa
gctgtagccgcggacaaaaatcgcaaagttaacattttgctgcgtgtgacgcctggcgtt
gaagcgcatacccatgaatatatctcaacaggacaaacggattccaaatttggattcgac
atcggcaatggaacggcatttgaagctattgaactggcttccaaacagtcgaacttggtg
ttactcggagtgcattcacacatcggatcccaaattttcgaagtggaaggattccaaatg
gcagttcaacgcgttgcggagtttgcagcaaatgtgtatgagcgtcttaacgttgcgttt
aaagtagttaatctgggcggtgggttcggtatccgctatattgatggggatacaccgctt
gaagtttcacaatacgtaaaagccatcacggatgcggtgaaaaatcattttgctcaaatc
ggctatgccgtgcctgagatctgggttgaaccgggccgcagcatcgtaggtgaagcggga
acaacgctctacactgttggaacaagcaaagatattccaggagttcgcaaatacgtagct
gtggatggcggaatgacagacaatccgcgtcctgcattgtatgagtccaaatatgaagcc
gtattggcaaatcgtgcaaatgaggctgctcaggaaacggtatctgttgctggtaaatgc
tgtgagagcggcgatatgctgatttgggatctggatctgcctaaagtgcaaagcggcgat
ctgcttgcagtagcttgcacaggcgcgtacaactactctatggcaagcaactacaaccgg
attcgtcgtcctgcagttgtgtttgtcaaagacggccaaggagacgttgtggtacgccgt
gagacgtatcaggacatcatccagaatgatctggtacctgagcgcattgcaaaacagcca
gttactcgttaa
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