Paenibacillus pabuli: KET34_23485
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Entry
KET34_23485 CDS
T09669
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KET34_23485 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_23485 (priA)
Enzymes [BR:
ppab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KET34_23485 (priA)
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KET34_23485 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Helicase_C_2
Cas3-like_C_2
PIF1
Flavi_DEAD
Zn_ribbon_6
T2SSE
RUBY_RBDX
ADDB_N
AAA_30
TIR
AAA_19
nSTAND_NTPase5
SLFN-g3_helicase
SPOUT_MTase_2
DAP3
Zot
AAA_16
Zn_ribbon_ISL3
DUF5117
Motif
Other DBs
NCBI-ProteinID:
UPK42159
LinkDB
All DBs
Position
complement(5197431..5199980)
Genome browser
AA seq
849 aa
AA seq
DB search
MEIAKVIVDVPVKQTDRPFDYLVPESMREWIEIGSRVGVPFGHRTVQGFVIDLVPRTGTE
TFKLKPIQELLDIVPPLSEDLVELAEWMSERYASNRILSLQVMVPTALKGKAERYISLGD
ALDGQVAGSASGEEVLFVWGEESTSEKVQQDIIRFVKSRGQVPLQQLSRKYPNHAALIKK
LLLNGVLLESQAIKDKMNKKTMKSINLAVDAAAAEQALTSFPIKAQRQKEVLTFLLEMKE
LLPMGMKELLSTLQVSAATVKGLEEKGLVITEDVEVFRDPYQGRKFRATEPLSLTDEQQH
VYNNINGRLQERRHGVFLLHGVTGSGKTEVYLQTIQRCIEQDRQAIVLVPEIALTPQMVE
RFKGRFGDQVAVMHSRLSGGERYDEWRKIREGQVKVAIGARSAVFAPFSRLGLIIMDEEH
ETSYKQEETPKYHARDVAVKRAQQHQAVVVLGSATPSLESYYAARSQSNDDFAPLLLEMP
TRALGNNLPEVRIVDMREELKDGNRSMFSRALHKGLEERLERGEQTVLLLNRRGYSTFVM
CRSCGYVAGCPECDISLTYHQRSNNLRCHYCGYAEAAPEVCPDCGSEHIRYFGTGTQRVE
EELAKLFPGIRVIRMDVDTTSEKGSHEKLLKQFREKKADVLLGTQMVAKGLDFPDVTLVG
VITADSALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVFVQSYTPEHYSIGHASQHDYV
SFVREELLHRRNLQYPPYCRLILVTFSHEQLPVLIRLAENYTRILKEKANAAGWLGSLDR
FSNDAFDVLGPVASPIPRIKNRYRFQCMIKWRGDVDAIGLALATARRMDDDVQAQKLQIS
LDVDPQMLM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgccaaggttattgtcgatgttcctgtgaagcagacggaccggccgtttgat
tatctggtgccggaatccatgcgtgaatggattgagattggcagcagggtaggtgtacca
tttggtcatcggacggtgcagggattcgtgattgatctagtacctcgcacgggtacagag
actttcaaactcaaaccaattcaagagctgttggatatcgttcctccgttgtctgaagat
ttggtcgaattggctgaatggatgagtgaacgttatgccagcaaccgcattttgtctttg
caggtgatggtgccgactgcgctgaaaggaaaagcagagaggtatatctcacttggagat
gccctggatggacaagtggctggttcggcttcaggcgaagaggtcctttttgtgtgggga
gaagaatcgacctcagaaaaggtacagcaagatattattcgttttgtaaaaagtcgtggg
caggtccccctccagcaactgagccggaaatatccgaatcatgctgcgctaatcaagaag
ttgttgcttaacggtgtcctgctggaaagccaggcaatcaaggacaagatgaataaaaaa
acgatgaagtcaattaatcttgctgtggatgcagcggctgcggagcaggcgttgacttca
tttccgataaaggcacaacggcagaaggaagttctcacttttttgctggaaatgaaagaa
ctgctgccgatggggatgaaggaattgctgtccacacttcaggtatcagcggctacagtc
aaagggttggaggagaaagggctggttataacggaggacgtcgaagtctttcgtgaccct
tatcagggacgcaagttccgtgcgaccgagccactgagtctgacggatgagcagcagcat
gtctataataatatcaatggtagattgcaggaaaggcgccatggcgtctttttgcttcat
ggtgtaacaggcagcggcaagacagaggtatacctccagaccattcaacgctgtattgaa
caggatcggcaggccattgtgcttgtacccgaaatagcgttgacaccgcagatggttgag
cgttttaaaggacgttttggtgatcaggttgccgtaatgcatagtcgtctgtctggtgga
gagcgttatgatgaatggcgtaaaatacgggaaggccaggtgaaggttgccattggcgcc
cgttcggcagtctttgctccgttcagtcgtctgggtctgatcattatggacgaggagcac
gagacttcatataaacaggaagaaaccccgaaatatcatgcccgtgatgtagcggtaaaa
agagcacagcagcaccaggcggtcgttgtcctgggttcagcgacaccttcgctcgaaagt
tactatgctgcccgttcacagagtaatgatgactttgcaccacttttgttggagatgcct
acccgcgcattgggcaacaatctgccggaagtacgaattgtggatatgcgcgaagagtta
aaggatggaaatcgctcgatgttcagccgcgctctgcacaaagggctggaagagcggttg
gagcgtggggaacagaccgtgcttctgctgaatcgacgtggatattccacctttgtgatg
tgtcgcagttgtggatacgttgcaggttgtcctgagtgtgatatctctcttacctatcat
cagcgctccaacaatcttcgttgtcactattgtggatatgcggaagcagcgccggaagtg
tgtccggattgcggcagtgagcatattcgatatttcggtacaggtacacagcgggtagag
gaagaattggcgaagctgtttccgggtattcgcgtcattcggatggatgtggatacaacg
agtgaaaagggttcgcatgagaagttattaaagcagtttcgcgaaaaaaaggcagacgtt
ttgctgggtacccagatggttgccaaagggcttgattttcctgatgttaccctggttggt
gtcataacagcagactcggcactcaatttgccggattttcgggctgccgaaaaaacattt
cagctgctcacccaggtggcgggccgtgctggtcgacatcaactgcctggggaggtgttc
gttcagtcctatacaccagagcattattcgattgggcatgcgagccagcatgactatgtt
tcgtttgtccgtgaggaattgctgcatcggcgcaatttgcagtacccgccttactgtcgt
ctaattttggtgaccttctcacatgagcagcttccggtactgatccggctggctgagaac
tacacacgaatactgaaagaaaaggcaaatgctgctggctggttaggcagtttggatcgc
tttagtaatgatgcctttgacgtgcttggcccggtagcatcaccgattcctcggatcaag
aatagatacagattccaatgtatgataaaatggcggggggatgtcgacgccattggactg
gcgctcgcgacggcccgacgcatggacgacgatgttcaggcgcagaagctgcaaattagt
ctggatgtagacccgcaaatgttaatgtga
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