Paenibacillus pabuli: KET34_24010
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Entry
KET34_24010 CDS
T09669
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab00220
Arginine biosynthesis
ppab00240
Pyrimidine metabolism
ppab00250
Alanine, aspartate and glutamate metabolism
ppab01100
Metabolic pathways
ppab01110
Biosynthesis of secondary metabolites
ppab01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KET34_24010 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KET34_24010 (carB)
00220 Arginine biosynthesis
KET34_24010 (carB)
Enzymes [BR:
ppab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KET34_24010 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
PA
MucBP_2
CoA_binding_2
DUF6273
Motif
Other DBs
NCBI-ProteinID:
UPK42249
LinkDB
All DBs
Position
complement(5298886..5302104)
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AA seq
1072 aa
AA seq
DB search
MPINKDLKKILVIGSGPIVIGQAAEFDYAGTQACQALKEEGVEVVLINSNPATIMTDTNM
ADKVYIEPITLDFVTQIIRQERPDGLLPTLGGQTGLNMAVELARAGVLERENVKLLGTQL
TSIEKAEDRDLFRDLMRELEQPVPESVIVTTLEESLDFANEIGYPIIVRPAYTLGGTGGG
ICANEEELRETVAAGLRYSPIGQCLVEKSIAGMKEVEYEVMRDKNDNCIVVCNMENFDPV
GVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEGGCNVQFALDPHSFQYYVIEVN
PRVSRSSALASKATGYPIAKMAAKIALGYTLDEIVNPVTGQTYACFEPTLDYIVSKIPRW
PFDKFVSANRKLGTQMKATGEVMAIGRTFEESIHKAVRSLEIGVHRLYLKDAETLDEATL
NERLVKADDERIFLIAEAFRRGYTLQQLQDLTKIDWWFLDKLEGLIGFEDRIREESELTS
ETLYQAKRLGFTDRAIAELRAQGQPGGTLTKETEVRARRVEENLRPVYKMVDTCAAEFEA
TTPYYYSTYETENEVIPSDKKKVVVLGSGPIRIGQGIEFDYSTVHAVWALQKAGYEAVII
NNNPETVSTDFNTSDRLYFEPLFFEDVMNVIEQEQPVGVIVQFGGQTAINLAAPLRAAGV
TILGTDLENIDEAEDRKKFEHLLSRLEIAQPKGKTVISVDDAVETAQSLGYPVLVRPSYV
LGGRAMEIVYSDSELLTYMEQAVKINPEHPVLIDRYMMGKEVEVDAICDGETVLIPGIME
HIERAGVHSGDSIAVYPPQHLSQDLKEKIVEITIKIAKELKTIGLVNIQFVIHDGQVYII
EVNPRSSRTVPFLSKVTNIPMANLATQAILGVKLKDLGYVDGLWPESDHVSVKVPVFSFA
KLRRVEPTLGPEMKSTGEVMGRDPNYAKALFKGLIGAGMKIPATGAIVVTVADKDKDEAV
PLLEGFYRLGYKIMATGGTAAALEAANIPVTTVNKLSEGSPNILDMIRSGEANFVFNTLT
KGKTPQRDGFRIRREAVENGIVCMTSLDTIRALLIMLQTINFSSEAMPAFVE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaacaaagatcttaagaaaatcctggtgattggttccggtccaatcgtcatc
ggtcaagcggccgagtttgactatgccggtacacaggcctgccaggcactgaaagaagaa
ggcgtggaagttgtactcattaacagcaacccggcaacaattatgacggatacgaacatg
gctgacaaagtctatatcgagcccattacactggattttgtaacgcaaatcattcgtcag
gaacgtcctgacggcttgctgccaacccttggcggtcaaacgggtctgaacatggctgtg
gaacttgcacgtgccggtgttctggagcgcgagaacgtcaaactgctcggtacccagctc
acatccattgagaaagcagaagaccgtgacttgttccgtgatttgatgcgcgaattggaa
cagcctgtacctgagagtgtaatcgtaacaacacttgaggaatcacttgattttgcgaat
gagattggttatccaatcatcgtccgtccagcttacacgcttggcggaacaggcggcggg
atctgtgcaaacgaagaagagctgcgtgaaaccgtagcagcaggccttcgttacagcccg
attgggcaatgtctggtcgagaagagcattgctggcatgaaagaagtcgagtatgaggtt
atgcgtgacaaaaacgataactgtatcgtggtctgcaacatggaaaactttgacccagtg
ggtgttcatacaggtgacagtatcgttgtggcgccaagccagacgctgtctgaccgtgaa
tatcagatgctgcgctccgcttctctgaaaatcattcgtgccctcaacattgaaggtgga
tgtaacgtacagtttgcgcttgatccacacagcttccagtattatgtgatcgaagttaac
ccgcgggtaagtcgttcttccgcgctggcttcgaaagcaacaggatatccaatcgcgaag
atggctgccaaaatcgcattggggtacacattggacgaaattgtgaacccggtaacgggt
caaacgtatgcttgttttgagccaacactggactatatcgtaagcaaaattccacgctgg
ccgttcgacaagttcgtctcggcgaaccgcaaactgggcacacagatgaaagcgacaggc
gaagtgatggccattggccggacatttgaagagtcaattcacaaagcagttcgttccctg
gaaatcggcgtgcaccgactgtatctgaaagatgctgaaacccttgatgaagcaacactg
aatgagcgtctggtcaaagccgacgatgagcgtatcttcttgattgctgaggcattccgc
agaggttatacgttgcaacagcttcaggatctgaccaagattgactggtggttcctggat
aaactcgaagggctgatcggcttcgaagatcgcattcgcgaggaatccgaactgacatcc
gagacactgtatcaagccaagcgccttggcttcacagaccgtgccattgctgagctgcga
gctcaaggtcagcctggtggcacattaacgaaagaaactgaagtaagagcacgccgtgta
gaagagaaccttcgcccggtatacaaaatggtagatacatgtgcagctgaatttgaagca
acaacgccatattactactccacttacgaaactgagaatgaagtcattccttcagacaag
aaaaaagtagtggtacttggttccggcccgatccggattggtcaagggattgagttcgac
tattcaacagtacatgcggtatgggctctgcaaaaagcaggctatgaagcggtaatcatt
aataacaatccggagacggtgtcaacggactttaatacatcggatcggttgtactttgaa
cctctgttcttcgaagatgtaatgaacgttatcgaacaggaacagcctgtaggtgttatc
gtacagtttggtggtcaaacggcaatcaacctggcagcaccactgcgtgccgctggcgta
acgattctcggaaccgatctggaaaacatcgatgaggcggaagatcgcaagaagtttgaa
catctgctctcccgtctggaaattgcacaacctaaaggcaaaacagtcatttcggtagat
gatgcggttgaaacggctcaaagtctgggttacccggttctggttcgtccttcctacgta
cttggtggtcgtgccatggagatcgtatactccgattccgaattgctgacctacatggag
caggcggttaaaatcaatccggagcatccggtcctgatcgaccgttacatgatggggaaa
gaggttgaggttgacgcgatctgtgatggcgaaacggtattgattccggggatcatggag
catatcgagcgtgcgggggttcactctggcgattccatcgcggtttatccgccacagcac
ctgtctcaggatctgaaagagaaaattgtagagattacaattaagattgccaaagaactg
aagacaattggtttagttaacatccagtttgttatccatgatggccaagtgtatatcatc
gaggtgaacccgcgttcatcccgtacagtacctttcctgagcaaagtaaccaacattccg
atggcgaacttggcaacacaagctattctgggcgtgaagctgaaagacctcggttatgtc
gatggtctgtggcctgagtcggatcatgtttccgtaaaagttccagtcttctccttcgcg
aagctgcgtcgtgtggagccaacccttggacctgagatgaaatccacaggtgaggttatg
ggtcgtgacccgaattacgccaaagcgttgttcaaaggtcttatcggtgcaggcatgaag
atcccggccaccggcgcaattgtggtaacggtagcggataaagacaaagacgaagctgta
cctttgctcgaaggtttctacagattgggttacaaaatcatggcaactggaggaacggca
gctgcgcttgaagctgcgaacattccggtgaccacggtgaataaattaagtgaaggttcg
ccgaacattctcgatatgattcgcagcggcgaagcaaactttgtattcaacaccttgacc
aaaggcaaaacgccacagcgtgacggattccgtattcgccgtgaagcggtggagaacggc
attgtatgtatgacttcactggatacgatccgtgcattgttgatcatgctgcaaacgatc
aacttctcctctgaggctatgccagcctttgtagaataa
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