Paenibacillus pabuli: KET34_26100
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Entry
KET34_26100 CDS
T09669
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KET34_26100 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_26100 (xth)
Enzymes [BR:
ppab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KET34_26100 (xth)
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KET34_26100 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2709
Motif
Other DBs
NCBI-ProteinID:
UPK42617
LinkDB
All DBs
Position
complement(5742877..5743632)
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AA seq
251 aa
AA seq
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MKLVSWNVNGLRACVTKGFMDYYNESQADIFCVQETKLQAGQIEMDLGEDVYQYWNYAVK
KGYSGTAVFTRIKPLSVWYGIEEDSESEGRMITLEFDHFYLINVYTPNAKRDLTRLPYRL
EWEDRFRGYILQLEQTKPVIVCGDLNVAHQEIDLKNPKPNLGNSGFTLEERGKMTDLLAA
GYVDSFRHLYPDRTDVYSWWSYMPKVRERNVGWRIDYFLVSNQLAPKVSDAHIDCHVMGS
DHCPVGLTLQL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgtcctggaatgtgaatggattgcgggcatgtgttaccaaaggattcatg
gattattataacgagagtcaggctgatattttctgtgtgcaggagaccaagctgcaggca
ggacagattgagatggatctgggagaagacgtatatcaatactggaattatgctgtcaaa
aaaggatactccggcaccgccgtatttacccggatcaagccgctatctgtctggtacggg
atagaggaagacagtgaatcggaaggtcgaatgattacgctggagtttgatcatttttat
ctaatcaacgtatatacccccaatgcgaagcgggatctgacccggcttccttaccgtttg
gaatgggaggatcggttcaggggttatatcctgcaattggagcagacgaagccggttatt
gtatgtggtgacctgaatgtagcccatcaggagattgacctgaagaacccgaagcctaat
ctcggcaactcgggattcaccctagaagagagaggcaagatgaccgatctgctggctgcc
ggatatgtggacagtttccgtcatctgtacccggatcgtacggatgtgtacagctggtgg
tcttatatgccaaaggtcagggaacggaacgtgggctggcgtattgattacttcctcgtg
tccaatcaactggctccgaaggtgtccgatgcgcatattgactgtcatgtcatgggcagt
gaccattgcccggtaggccttacgttgcaactgtag
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