Paenibacillus pabuli: KET34_27680
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Entry
KET34_27680 CDS
T09669
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppab03019
]
KET34_27680
03009 Ribosome biogenesis [BR:
ppab03009
]
KET34_27680
Messenger RNA biogenesis [BR:
ppab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KET34_27680
Ribosome biogenesis [BR:
ppab03009
]
Prokaryotic type
rRNA processing factors
KET34_27680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
UPK42890
LinkDB
All DBs
Position
complement(6091114..6092364)
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AA seq
416 aa
AA seq
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MKQMIVHNEHNLMQMALLEEGKAVEFMAERTRERGLLGSYFKGRVVNVLPGMQAAFVDIG
QKKNAFLYVDDVLHPNLEKQPKVKPSIAELLRPGQDVIVQVLKEPVGSKGARVTTHYSLP
GRWLVYMPLADYVAVSKKIAREGDRSRLKILGEQLRRDEEGLIIRTVSAEEQREAIQADL
ETLREHWRLIREKADSLPSPSLLHRDHSMVQRIIRDVYTPGIDEVITDNDVQARELSALL
EEICPGHQPKVQVYRGEESIFAAYRVQEQLNKDFARKVWLPGGGYIVIDHTEALTVVDVN
TGKYTGAGGDSLEETVTETNMQAAVEIARLMRLRDIGGMIIVDFIDMEEAMNRHEVAATL
ENELKKDRTKAFVIGWTKLGLLELTRKKVREESTLPYVEPCSSCHGTGKRYISPLH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatgattgtacataatgaacataacctcatgcaaatggcgcttctggaagaa
ggcaaagctgtagaattcatggcagagcgtacacgcgagcgtggactgctgggttcgtat
ttcaaaggacgggtagtgaacgtgttaccaggtatgcaagctgcttttgtggatatcggt
cagaaaaagaatgcttttctgtatgtggacgatgtattgcatcccaatctggagaaacaa
cccaaagtgaagccctcgatcgcggagctgcttcgtccaggtcaagatgtaatcgttcag
gtcctgaaggagccagtaggaagcaaaggagcccgggtgacgactcattattcgctgccg
ggccgctggcttgtctacatgcctttagcggattatgtagctgtctccaagaaaattgct
cgtgagggggatcgatcccgcctcaagatcctgggtgaacaactgagacgggacgaagag
gggcttatcatacgaaccgtatccgcagaggaacagagggaagccattcaggccgacctg
gaaacattacgtgagcactggcgtctgattcgtgaaaaagcggatagtttgccttcacca
agcctgctgcaccgggatcatagtatggttcagcggatcattcgtgatgtgtatacacct
ggcattgatgaagtgattacggacaatgatgtacaagctcgtgaattgagtgctttgctg
gaggaaatctgtccaggccatcaacctaaagtacaggtgtataggggagaagaatcgatt
tttgctgcttatcgagtgcaggagcagttgaacaaggattttgcccgcaaggtatggctg
cctggaggcggatatattgtcattgatcataccgaggcactcactgtagttgatgtcaat
acaggcaagtacacaggagcaggcggcgacagtctggaagagacagtaacggagacgaac
atgcaggcagcggttgagatcgcccgtttaatgcgtcttcgggatatcggcggcatgatt
attgtggacttcattgatatggaggaagcgatgaatcggcatgaagttgcggcaacgctg
gaaaatgaactcaagaaggatcgaaccaaggcttttgtcataggttggaccaagctgggc
ttgctcgaacttacccgtaagaaggtacgggaggagagcacgctcccttacgtggagccg
tgttcttcctgtcatgggacaggtaaaagatatatttcgcctttgcattga
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