Paenibacillus pabuli: KET34_29080
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Entry
KET34_29080 CDS
T09669
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
ppab
Paenibacillus pabuli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
UPK43133
LinkDB
All DBs
Position
6404094..6406481
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AA seq
795 aa
AA seq
DB search
MRSFSYLHKMVVFGILLSTLPILLTGIAAFIYSSKQSELHRIQANKQLLIQMQTNVEHKL
ATVSYMLDQAVRSPDTLRSLTSSSSIQDTGPLFAEKLQNEFNNMRSWEPLMDITLVNQTQ
DWLINHAGLYLNTEFPMALPMKDLLSNTLTSGWQLTPSSVFNNEERIVDSGCIYHIALAR
TIPHINVSSDAALIAGIPACSLQKAMEENSPDKFAAGLIILNREQRIMVHPDPVYIGQPL
EAAGIWDSNSRANFSELLSKRGFAASSGQREVRIADTDYSLSYTHSALKGWTYILVSPRN
ILTHEYVQIGLHTMYISTAMLLLSLLLSWIGSRRMHIPIRKLLIQLGHKPLSKGHSKTHS
ILHIDEFEQIRTGISQLTASQSQLESKLNQYNLQLRTHFLINLLLGKNPPSTLHDNLREN
GYDSQLQEWQQIAVIAVQADLVNHTKYHAKDRDLLLFAIQNILEESVYAEQQLLPVVYEH
TVVTIIGSPDQDGVRFSKHLSTLTEQLQYQIREILSLQVSIGFSQPRASLFQIPQAYTEA
LEALKHRMKLGAGIIFQFEAVDNRTSYWALSYPESLEYTLLQAIQNADEAHASSLLHQLL
EVLFGMECTPEEYQVALTRLLTHILQMMQESGIRLGQISKGHGSIFNELHALQYAAEVEQ
WFNEHIIIPIILILKERQYAQYQHISEKMIAIIQQEYDKDLTLEECASRLHYNANYLSSV
FRKETGCAFSEYLTKHRFSIAKKWLDESELTVKDIAARLRYNNPQNFIRSFRKWEGITPG
QYRERRQKAELSMKQ
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatcattcagctatctacataagatggtggtcttcggaatcttgttaagtacgctg
cccattctgttgaccggaatcgctgcttttatctattcttcgaaacaatcggaactgcac
cgtattcaagccaataaacaactgctaatccaaatgcaaaccaatgtggagcacaaactt
gccaccgtaagctatatgctcgatcaggccgttcggtcaccagacacgctccgttcgcta
acttcatcatcatcgatccaagacactgggcctttgtttgctgagaagctacagaacgaa
tttaataatatgaggtcatgggagcctctaatggatattacactcgtaaatcagacacag
gattggcttattaatcatgctggcctgtaccttaatactgaatttccaatggctctgccc
atgaaagacttgttatcaaacacgctcacatccggatggcagcttacaccatcatctgtg
tttaacaatgaggagcgtatagtggattccggctgcatttatcacattgcacttgcgaga
acgataccccatataaatgtttcttctgatgctgcacttattgcaggaatacccgcgtgt
tcactgcaaaaagcaatggaagagaattctccggacaagtttgccgccggactgattatt
ctgaatcgtgaacaacgtattatggttcatcctgatcctgtttatattggacaacctttg
gaagcagcaggaatatgggacagcaattcgagggccaactttagtgaattgttatctaag
cgtgggttcgccgcctcttcaggtcaacgtgaggtacgtattgcagacactgactactcg
ctgtcctatacgcattctgctctaaaagggtggacatatattctcgtttcgcctaggaac
attctaacccacgagtatgttcagattgggttgcacaccatgtatatcagtaccgctatg
ctactgctctccctattactctcatggattggatcaaggcggatgcacatccccatccgt
aaacttcttatacagctcggtcacaagccattgtccaaaggtcattccaaaacccattct
atactccatatagatgaattcgagcaaatcagaaccggcatttctcagctaactgcttca
caatcccaacttgaaagcaaattaaatcaatataacttgcagctccgtactcatttttta
atcaacctgcttctgggcaaaaatccaccctctactcttcatgacaacctcagagagaat
ggttatgattcacagcttcaagagtggcaacaaatagccgtcattgcagtccaggctgat
ctcgtaaatcacaccaaatatcatgccaaagatcgtgatctactgctgtttgccattcaa
aatatactggaggagagtgtttatgcagaacaacagctgcttcctgtggtctatgaacat
actgtcgttacgatcatcggttcacctgatcaagacggggttcgtttttcaaaacatctg
tctacattaacggaacaacttcaatatcaaatcagagagatccttagtctgcaggttagc
attggttttagtcagcctcgtgcctccctgtttcagatcccgcaagcttatacggaggcc
cttgaagcgctcaaacatcgaatgaagctaggagcaggcatcatctttcaatttgaagca
gtcgataatcgtacatcctattgggcgctatcttatcccgaatcactggaatatacgctc
ttacaggctatccaaaatgcagatgaggctcatgcctcctctcttcttcaccagttgctt
gaagtactgtttggcatggaatgcacaccagaagaatatcaggtagcacttacccgatta
ttaacacatattttgcagatgatgcaggaatccggtatacggctgggacagatctccaaa
ggccatgggtccatcttcaatgaacttcatgcgctgcagtatgcagctgaggttgagcag
tggtttaacgaacatatcatcataccgatcattcttattctgaaggaacgacagtacgct
caatatcagcacatatccgagaaaatgattgccatcatccagcaagaatacgataaagat
ctgacgttggaggagtgcgcatccagactccactacaatgcaaattacctgagtagtgtg
tttcgcaaagaaacaggctgtgcattcagtgagtatctgacaaagcaccgcttcagtata
gctaaaaagtggctggacgaaagcgagctaacggtcaaggacatcgctgcacggcttcgt
tacaataacccgcagaactttattcgctctttccgaaaatgggaagggatcacgcctgga
caataccgagaacgtaggcagaaggctgaattgtccatgaagcagtag
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