KEGG   Paenibacillus pabuli: KET34_29345
Entry
KET34_29345       CDS       T09669                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
ppab  Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:ppab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppab03021]
    KET34_29345
Transcription machinery [BR:ppab03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KET34_29345
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF HTH_50 TnsD GerE HTH_38 HTH_28 KORA HTH_10 HTH_Tnp_ISL3 HTH_24 HTH_29 MarR MarR_2 DUF1492 HTH_3 HTH_31 Trp_repressor Phage_antitermQ CENP-B_N
Other DBs
NCBI-ProteinID: UPK43165
LinkDB
Position
complement(6446977..6447750)
AA seq 257 aa
MNEKVTPPESMSEAIGLIWEYQQTQDNEIATVLIRKYEPMVKMAAGKIARNRPDLYEDLY
QTGQMALIRLLKQYDINLGIPFEPYAMKSMIGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPGVNEIAEYLDLTPEETIEVLAGRECYHYVSLDSPLSQDESAATLGEL
ISSDVNDFDSVEKRMDLQQALGQLKEQEQKVLILAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNASLL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaatgaaaaagtgactcccccagagtccatgtctgaagctataggtttgatctgggaa
taccagcaaacccaggataacgaaattgcaacagttcttatccgcaaatatgaaccgatg
gtgaagatggcagcaggtaaaattgctcggaatcgacccgatctgtatgaggatttgtat
cagaccgggcagatggctctgattcgtttgctgaagcaatacgatatcaatctcggaatt
ccgtttgaaccttatgccatgaagagcatgatcggtcatatgaaaaattatttaagggac
aagtcttggtatattcaggtgccccgcagaattaaggaaaagggagcccttgtccagcat
gccattgatgaattgacagtgaagctggaacgttcaccaggtgtgaacgagattgctgaa
taccttgatttaacccctgaggaaaccattgaagtcttggctggtcgggaatgttatcac
tatgtgtcactggattctccgctatcacaggatgagagtgcagccactttgggtgagttg
atcagttcggatgtgaatgactttgattcggttgagaagcggatggacttgcagcaggca
ttgggacagttgaaggaacaagaacaaaaggtgcttattttggcatttcaggatggtcag
tcacagcgggccattgctcagaaattgggagtctcccaaatgagtgtatcccgtatccag
aagcgagccaccgagaaattaaaacagattatgtcgaatgcttccttgttatga

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