Paenibacillus pabuli: KET34_30525
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Entry
KET34_30525 CDS
T09669
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppab03016
]
KET34_30525 (truA)
Enzymes [BR:
ppab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KET34_30525 (truA)
Transfer RNA biogenesis [BR:
ppab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KET34_30525 (truA)
Prokaryotic type
KET34_30525 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
UPK43361
LinkDB
All DBs
Position
complement(6696604..6697377)
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AA seq
257 aa
AA seq
DB search
MRNLCMTLTYDGTAYYGFQVQPGGNTIQDHLEDAIFALTGEKVKITGSGRTDAGVHARRQ
IFNFPTESQIPIERWCIALNARLPSDIIVIDAVEVPNDFHSRYAAKKKTYRYTINANQFP
DVFNRRLQYHHHAKLDIAAMQEGLRHFIGTYDFTSFASRKSQKENHVRSVYEAWIEVDRS
MCRDHPRDQGVIHVYVSGNGFLQHMVRIIVGTLLEIGEGKRKAADVPNMISACNRSAAGP
TAVSCGLMLWDLEYKKD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgtgtatgacgttaacttatgatggcactgcctattacggctttcaggtt
cagccgggtgggaataccattcaggaccatcttgaagatgccatttttgctctaaccggt
gagaaggtcaaaattacaggttcaggcagaacggatgcaggcgttcacgcacgcagacag
atcttcaatttccctacggaatcccagatcccgattgaacgatggtgtattgcgctcaac
gccagattaccatccgatattatcgttattgatgcggttgaagtacctaacgattttcat
tctcgctatgcagcgaaaaagaaaacctatcggtataccatcaatgcgaatcaatttccg
gatgtattcaatcggaggctgcaatatcatcatcatgccaagctggatattgcggcaatg
caggagggtttgcgtcattttattggtacgtatgatttcacctcctttgcttcacgcaag
tctcagaaagaaaatcatgtacgttcggtatacgaagcatggatagaagtggaccgatcc
atgtgtagggaccatccgcgcgatcagggtgtcattcacgtctatgtgagtggtaacggc
tttttgcagcatatggttcgtatcattgtgggtacactgctggagatcggagagggcaaa
cggaaagccgctgatgtaccgaatatgatttctgcttgtaatcgttctgctgcaggacct
actgcggttagctgcggtttaatgctctgggaccttgaatacaaaaaagattga
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