Paenibacillus pabuli: KET34_30885
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Entry
KET34_30885 CDS
T09669
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03420
Nucleotide excision repair
ppab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KET34_30885 (pcrA)
03430 Mismatch repair
KET34_30885 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_30885 (pcrA)
Enzymes [BR:
ppab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KET34_30885 (pcrA)
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KET34_30885 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KET34_30885 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
GBS_Bsp-like
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UPK43427
LinkDB
All DBs
Position
complement(6760043..6762403)
Genome browser
AA seq
786 aa
AA seq
DB search
MQPVNIHDAVARLNTPQRQAVEATDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWGI
LAITFTNKAAREMQDRVSQLVGGSQGRDIWVSTFHSMCVRILRRDIERIGFTSNFSILDS
SDQLSVIRSCMKDQNIDTKKFEPKAVQSMMSTAKNELISPEQYEKQAADYFEGIVAKVYK
MYQKRLRANNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCRM
LADSHHRICVVGDSDQSIYRWRGADISNILNFEKDYPEAQTILLEQNYRSTSNILNAANE
VIGLNTGRKPKKLWTDKEGGSKIKVYRADSEHDEGYFVTSEISKNVKNGKSYQNHAILYR
TNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLLSNPDDDISLTRIINVPK
RSIGDTTVAKLAAAAGERGISIFRVLQVVDDLGFAGRTRNALVEFYDMIAALHQMVEYLS
VTELTEKILEMSQYRLEMQNENTLESRARLENIDEFLSVTMEFEKNNEDKTLVSFLTDLA
LIADIDSMNDDEEDQSDAVTLMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFMDNEELEEE
RRLAYVGITRAEEQLFLSCAQMRTLFGRTTANPPSRFLDEIPDELKEDTSIARDRYRRGS
SAGGSYGGRGLGASGGSNFGGGSSAKLFEQQSRGGSSATASTPTSRVTTSTSRPAYATPT
SASKPAASNGEAGFKAGDKVQHGKWGTGTIVGVKGTGNDTELQIAFPAPVGLKRLLAGFA
PITKVE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgtaaatatacatgatgccgtagcacggcttaacaccccccaacgacaagcc
gtcgaagcgacggatggaccgctgctaataatggctggagcgggcagtggcaaaacccgt
gtgcttacacaccggattgcctatctgattgcaacacgaaaagcaccaccgtggggtatt
ttggctattacctttacgaacaaagcagcacgcgagatgcaagaccgggtatcccaactc
gttggcggctctcagggtcgtgacatttgggtatccacgtttcactccatgtgcgtgcgt
attttgcgccgtgacattgaacgtatcggattcacctccaatttcagcattttggactca
tctgaccaattatctgtcattcgtagttgtatgaaagaccagaatatcgacaccaagaaa
tttgaaccaaaagccgttcagtcgatgatgagtaccgcgaagaatgaattgatcagcccg
gagcaatatgagaagcaggctgctgactattttgaaggcattgtggcgaaggtatataag
atgtaccagaaacggctcagagccaacaactcgctcgacttcgacgatctcatcatggcg
actattcaactgttcaaagaagtgccggaagttctcgacttttaccaaaagaaattccaa
tacatccacgtcgatgagtatcaggataccaaccgtgcgcagtacatgctttgccgcatg
ctcgctgacagtcatcaccggatctgcgtcgtaggggatagtgaccaatccatctatcgc
tggcgtggagcggatatcagcaacatcctgaactttgagaaagactatccagaggcacag
accatcttgctggagcaaaactatcgttccacttcgaatatcctgaatgcagcgaatgag
gtaatcggcctgaatacgggacgcaaaccgaaaaaactgtggacggacaaagagggtggc
tccaagatcaaggtgtaccgtgcggattccgaacatgatgaggggtattttgtaacctct
gagattagtaaaaatgtgaagaacggcaaatcctatcagaatcacgctattttgtatcgt
accaatgcccagtcccgggttatagaggaaattttgatcaagtctgatattccgtatcag
atcgttggcggcatcaagttctatgatcgtaaagagattaaggacattctggcctatctg
cgcctgctttccaaccctgatgatgacatcagccttactcggattattaatgtaccgaaa
cgcagcattggggatacaacagttgcgaaactggcagctgcggcaggagaacggggaatt
tccatattccgtgtgcttcaggtcgtggacgatctcggttttgccggtcgaacgcggaat
gcgctggtggagttctatgacatgattgccgcgctgcatcagatggtagaatatctgtct
gtgaccgaactgaccgagaagattctcgagatgagccagtaccgactagagatgcaaaat
gaaaacacactcgaatcccgtgcacggctggagaacattgatgagttcctgtccgttacg
atggaatttgagaaaaataatgaagacaaaacactcgtttcgttccttaccgatctcgca
ttgattgcggatatcgacagcatgaacgatgatgaagaggatcagagtgacgcagttacc
ctgatgacgatgcacagtgccaaaggtctggaattccccgtcgtctttatcattggtatg
gaggaaggggttttcccgcacagccgggccttcatggacaacgaggagttggaggaagag
cgcagattggcttatgtgggcatcacgcgtgctgaagaacaactcttcctgtcttgcgcg
caaatgcggaccttgttcgggcgcacaacagcgaacccgccttcacgcttcctggatgaa
attccggatgagctaaaagaagatacctccatcgctcgtgaccgctaccgtcgtggcagc
agcgcaggtggatcatatggtggccgtggactgggagccagtggcgggagcaactttggt
ggcggcagttcggccaagctttttgaacaacaaagtagaggtggttcttctgccaccgca
tccacaccaacttcgcgtgtgactacaagtacttcccgcccagcatatgctacgccaaca
tctgcttccaagcccgcggcttctaatggtgaagcagggttcaaggccggagataaagta
caacatggcaaatggggaacaggtacgattgttggggtgaaaggtacaggtaatgacaca
gagcttcagatcgcgttcccggccccggtgggcctaaaacgtctgcttgcaggctttgct
cccattaccaaagtagaatag
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