Palaeococcus pacificus: PAP_00110
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Entry
PAP_00110 CDS
T03210
Name
(GenBank) transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppac03000
]
PAP_00110
Transcription factors [BR:
ppac03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PAP_00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_11
NirdL-like_HTH
HTH_IclR
HTH_20
MarR
HxlR
MarR_2
Sigma70_r4_2
TrmB
HTH_Mga
HTH_DeoR
HTH_23
Sigma70_r4
HTH_5
HTH_36
HTH_29
HTH_28
HTH_Crp_2
HTH_12
HTH_27
TFIIE_alpha
Rrf2
HTH_45
LexA_DNA_bind
HTH_10
AsnC_trans_reg_3
HTH_1
HTH_34
HTH_Tnp_ISL3
DUF7343
FaeA
Myb_DNA-bind_8
Fe_dep_repress
RWP-RK
HTH_50
P22_Cro
DUF2805
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AIF68470
UniProt:
A0A075LP41
LinkDB
All DBs
Position
20339..20767
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AA seq
142 aa
AA seq
DB search
MGIDERDRIILDILSKDARTPFTEIAKVLGISETAVRKRVKSLEEKGVIKGYKVEVDPAK
LGYGLVSLTGIDTLPEKLFEVAEKVKSFDFVKNLYLTSGDHMIMAEVWAKDGEDLAEIIS
TKIGKLEGVIKVCPAIILEKIK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgatgagagagataggataatacttgatatactttccaaggacgcgaggacg
ccttttacagagatagcgaaggttttgggcataagtgaaactgcggtgaggaagagggta
aaatccttggaggaaaaaggggtcatcaaaggctataaagttgaagtggatcccgcaaag
ttaggctatgggttggtaagcttgacaggaatagatactttgcctgaaaaactatttgag
gttgcagagaaggtcaaaagctttgacttcgtgaagaacctgtatctcacgagcggtgac
cacatgataatggctgaagtttgggcaaaggacggcgaagatttagcggagataatctcc
accaagattggaaagcttgagggtgttataaaagtctgccctgctataatattggagaag
attaaatga
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