Palaeococcus pacificus: PAP_01870
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Entry
PAP_01870 CDS
T03210
Name
(GenBank) H/ACA RNA-protein complex protein Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppac03016
]
PAP_01870
Enzymes [BR:
ppac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PAP_01870
Transfer RNA biogenesis [BR:
ppac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAP_01870
Prokaryotic type
PAP_01870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
SIR2_2
Motif
Other DBs
NCBI-ProteinID:
AIF68811
UniProt:
A0A075LRS0
LinkDB
All DBs
Position
331216..332229
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AA seq
337 aa
AA seq
DB search
MVKKKKRERKYLLPADTKREIVIKDDKAETNPKWGFSPYERPIDLHIKYGVINLDKPPGP
TSHEVVAWVKRILNLNKAGHGGTLDPKVSGILPTALENATRVVQALLPAGKEYVALMHLH
GDVKKEKILQVMSEFEGEIIQRPPLRSAVKRRLRTRKVYYIDVLEIDGRDVLFRVGVEAG
TYIRSLIHHIGLALGVGAHMAELRRTRSGPFKEDETLVTLHDLIDAYHFWKDDGIEDYFR
KAIQPMEKAVEHLPKVWIRDSAVAAVTYGADLAVPGIVKLHKGIKRGDLVAIMTLKDELV
ALGKAIMTSGEMLNEKKGIAVDVEKVFMPRDWYPKMW
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaagaaaaagagggagagaaagtaccttttgcctgcggatactaagagagag
attgtgataaaagatgataaggccgaaacgaatcctaagtggggcttttctccatatgaa
aggccaatagatttgcacataaagtatggggttatcaatttggacaagcctccgggacct
acttcccatgaggttgttgcgtgggttaagagaattttaaacttaaataaggcgggccac
ggtggaacccttgaccctaaggtgagcggtatccttccaacagctttggaaaatgctacg
agagtagttcaagctcttttgccagcgggaaaagagtatgtggctttaatgcatcttcac
ggtgatgttaagaaggagaaaatacttcaagtaatgagcgagtttgaaggtgagataatt
cagaggccgcctttgagaagtgctgttaaaaggagattgagaaccagaaaggtttactac
attgatgttttggagattgatggtagggatgtcctttttagagttggtgttgaggctggg
acttacataaggtcgctcatccaccatataggcttagcattgggagtaggcgctcacatg
gccgagcttaggaggacgaggagcggacccttcaaggaggatgaaaccctcgtaacgctt
cacgatttgattgatgcctatcacttttggaaggacgatggaatagaggattactttaga
aaagcaatccaaccgatggagaaagcggttgagcacttgcccaaggtgtggattagggac
tcagcggttgctgccgtaacctatggggcagacctagcagttcccggaatcgttaagctt
cataaaggcattaagcgcggtgacctcgtggccataatgacgctcaaagatgagcttgtc
gcgttgggcaaagctattatgacaagcggcgagatgctcaacgaaaagaagggtatagcg
gtcgatgtggagaaggtgttcatgcctagggattggtatccaaagatgtggtag
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