Palaeococcus pacificus: PAP_02715
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Entry
PAP_02715 CDS
T03210
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAP_02715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppac03021
]
PAP_02715
Enzymes [BR:
ppac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAP_02715
Transcription machinery [BR:
ppac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PAP_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
AIF68965
UniProt:
A0A075LQH6
LinkDB
All DBs
Position
468107..470824
Genome browser
AA seq
905 aa
AA seq
DB search
MQSIKKVIGKIEFGILAPQEIRKMSAVEVTVPDTYDDDGYPIDGGLMDKRLGVIDPGLRC
ETCGARAGECPGHFGHIELARPVIHVGFAKTLYRVLQSTCRECGRIMLTDEEIEEYTRKF
EFAEGRRGEINKLIKEIHKKVKERKTCPHCGAPQFPLKFEKPTIYWEIRKDEEGNEYKHR
MMPSEVRDRLEKIPDKDLLLLGFHPENSRPEWMVLTVLPVPPVTARPSITLENGVRAEDD
LTHKLVDIIRINNRLKTNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPAAKHKSGRP
LKTLSQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPLAIAMELTVPEKVT
EFNIEKLKKLILNGPETYPGANYVLDPYGRRIKIMETNREAILEMLDIGWTVERHLMDGD
VVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLSVCPPYNADFDGDEMNLHVPQTQEAQAE
ARILMEVQNHIISPRYGGPLIGGIQDHISGGYLLTKEGAYFTRLEVEQMLLFAGVDIDEL
PEPDKVENGVEFWSGKTVFSLILPKDLTIWYENKLGCQDKKKCEKLKKAIEEKLILSDDD
IRELADDGFVYIRNGKLLSGAIDKKAYGREDGRLLNLIVKEYGVEAGRKFLDQVTKLAIW
TITHKGFTTAIDDEDLPQEAIERIREIIREAENKVNQLIEAYKMGELDALPGKTLEETLE
SLIMQKLAEARDQAGDIASQYLGMGNHAVIMAKTGARGKILNITQMAAMLGQQSIRGKRL
YRGYRGRVTSHFKPSDLGARAKGFVVNSYKSGLTPTEYFFHAMGGREGLVDTAVRTAQSG
YMQRRLINALQDLKVDYDGTVRDPTGIIVQFRYGEDGVDPMRSWSGKTVDVDRVIVRTLL
KMRGE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaattaagaaggttattggcaaaatagagtttggtatccttgctcctcaagag
atacgcaagatgagtgctgtagaagtcactgttcctgacacttacgatgatgatggttac
ccaatagatggaggcctaatggacaaacgcttgggtgtcattgaccccggtttgagatgt
gaaacctgtggggctagagcgggtgaatgtccaggtcactttggacacattgagcttgcc
agacccgtaatacacgtaggatttgcaaagaccctctacagagttttgcaaagcacttgt
agagagtgcggaaggataatgctcacggatgaggagattgaggagtatacaaggaaattt
gagtttgcagagggcaggagaggcgagataaacaagctcattaaagagatacacaaaaaa
gtcaaggagagaaagacctgccctcactgtggtgctcctcaattccccttaaagtttgag
aagcctacaatatactgggagatcagaaaggatgaggaaggcaacgagtacaagcacaga
atgatgccaagtgaagtgagggacagacttgagaagatccctgacaaggacttgctttta
cttggcttccacccagagaactcaagaccagagtggatggttctcacagttctcccagtt
ccgccagttaccgcgagaccttcaattactttggagaacggtgtaagagcggaagacgat
ttgacacacaagctcgttgatatcattaggattaacaaccgtctaaagacgaacattgaa
gcaggtgcaccgcaactcattattgaagacctttgggacctccttcaataccacgtcacc
acttacataaacaacgagacttcaggtgtcccagcagcaaagcacaagagcggaaggcca
ctcaaaacgctctctcaaagattgaagggtaaggaaggtaggttcaggggtaacttgagc
ggtaagcgtgttaacttctcagcacgtactgttattagtccagacccaatgattagcatt
aacgaagttggtgtgcccttagctatagcaatggagctcacagtgccagagaaagtaaca
gagttcaacatcgagaagcttaaaaagcttattttgaacggtcctgaaacgtacccagga
gctaactatgttttggatccatacggaagaagaatcaagataatggaaactaatagagaa
gctatcctcgaaatgcttgatattgggtggacagttgagagacacctaatggatggggat
gttgtccttttcaacagacagccctctctccacagaatgagtatcatggctcaccgcgta
agggtaatgccatacaagacgtttagacttaatctgtcagtctgcccaccatacaacgcc
gattttgatggagatgagatgaacttacacgtgcctcaaacacaggaagctcaagcagaa
gctagaatcttaatggaagttcaaaaccacatcatctcaccaagatacggtggacctctc
attggaggaatccaagatcacatctcaggtggatacctcttaactaaggagggagcatac
ttcacaaggcttgaagttgagcagatgctcctatttgcaggcgtcgacattgacgagctt
ccagagcctgacaaggtagagaatggggtcgaattttggagcggcaaaacagtattttca
ctaatcttaccaaaagacctgacgatttggtacgagaacaaattaggctgccaagataag
aagaaatgcgagaagctaaagaaagccattgaagagaagctcatattaagcgatgatgat
attagagagctagcagacgatggttttgtttacataaggaacggcaagctcttgagcggt
gcaattgacaagaaggcctatggtagggaagacggtaggctcttgaacctaatagtcaag
gaatacggcgttgaagctggaaggaagttccttgaccaagttactaaactcgccatatgg
acaattacacacaaaggattcacgacagctattgatgacgaagacctgccacaagaagct
attgagaggattagggagataattagagaagcagagaacaaggttaaccagctcattgag
gcatacaagatgggagagctagatgctctgccaggtaagaccttagaggaaaccttggag
agtctcattatgcaaaagcttgctgaggcgagagaccaagccggtgacatagcttcccaa
tacttgggtatgggtaaccacgcggtgatcatggccaagacaggagcaagaggtaagata
cttaacatcacgcagatggccgctatgctcggacagcagtcaattagaggtaagagactg
tacagaggttatagaggaagggttacgagccacttcaagcccagcgatttgggagctagg
gctaaaggattcgttgtaaactcctacaagagcggtctaacacccacggagtacttcttc
cacgcaatgggtggtagggaaggtctcgtcgatacagcagttagaacagcccaaagcggt
tacatgcagcgtagacttataaacgcactccaagacctcaaggttgactatgatggaaca
gtgagagatccaacaggaataatcgtccaattccgctatggtgaggatggagtagaccca
atgaggagctggagcggaaagacggtagatgtggatagagttattgtgagaactttacta
aagatgaggggtgagtga
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