Palaeococcus pacificus: PAP_03645
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Entry
PAP_03645 CDS
T03210
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PAP_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppac03019
]
PAP_03645
03012 Translation factors [BR:
ppac03012
]
PAP_03645
Messenger RNA biogenesis [BR:
ppac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PAP_03645
Translation factors [BR:
ppac03012
]
Eukaryotic type
Release factors
PAP_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
MCM6_C
Clr5
Zn_ribbon_8
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
AIF69149
UniProt:
A0A075LS90
LinkDB
All DBs
Position
complement(625068..626315)
Genome browser
AA seq
415 aa
AA seq
DB search
MSHTSAEMYELKKKVEELKKIRGRATELVSLYIPAGYDLNKVMQQLREEYGTAQNIKSKS
TRKNVLGALERAMQHLKLYRQTPPNGLALFVGNVSEQEGVSDIQVFAIVPPEPINVRLYR
CDQTFVTEPLEEMLRVKEAYGLITVEKNESTIGILRGKKIDVVDDLRSTVPGKTRAGGQS
ARRYERIREQETHEFMKRIAEHANNAFLPLLEKGELKGIIIGGPGPTKEEFVEGDYLHHE
LRKKIIGVVDISYHGEYGLRELVEKASDILAEQEAVKERKLIQNFFKHLVKDTGLITYGE
KEIRKALEMGAVDTLLISEGYDKIRAKVKCNACGWEELKTMRESEFDTFKKQIKTCPKCG
SQNLSFEKWEVAEELIKMAEDIGANVEIISLDTDEGQQFFRAFGGLGAFLRYKLQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacacttcagctgagatgtatgaactaaagaaaaaagtggaggagctaaagaaa
ataagaggaagagcaacggaactcgtttccctttacatccccgcaggatatgatttgaat
aaggtaatgcagcagcttagagaggagtatggaactgcgcagaacatcaagtcaaaatca
acgaggaaaaacgtccttggagcattagaaagggcaatgcagcacttaaagctctacagg
cagacacctcctaatggtttagcccttttcgttggaaacgtgagcgagcaagaaggtgtt
agcgacatccaagtgttcgcaatagtccccccagagcccatcaacgttaggctctatcga
tgtgatcaaaccttcgtgacggagccccttgaagagatgctccgtgttaaagaggcttat
gggcttataaccgtagagaagaacgaatccacaataggtattttaagagggaagaaaata
gatgttgtggacgatctgaggtcaacggtgccaggcaaaacgagagccggtggtcagtcc
gctcgaagatatgagcgtattagggagcaggagacgcacgaattcatgaagcgcattgcg
gagcacgcaaacaatgcatttttacccctcctcgaaaagggagagctcaaaggcattatc
ataggcgggccagggccaacaaaagaagagttcgttgaaggtgattatctgcaccacgag
cttagaaagaagattatcggagtggttgatataagctaccatggagaatacggtttgagg
gagctcgttgaaaaggcgagcgacattttggcagagcaggaagctgttaaagagagaaag
ctcatccaaaacttcttcaagcacctcgttaaggacacgggcttgataacctacggtgag
aaggagataaggaaagctttggagatgggagcagttgacacactcctgataagcgaagga
tacgataagattagggcaaaagtaaagtgcaacgcctgcggctgggaagagctcaagaca
atgagggagagcgaatttgatacctttaagaagcagattaaaacatgtccaaagtgcgga
agccaaaacttgagcttcgagaagtgggaagttgcagaggagctaataaaaatggcagag
gatataggagcgaatgttgaaataatttccctcgacaccgacgaaggccagcagttcttc
agagcatttggaggcttaggagcattcttgaggtataagcttcaatga
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