KEGG   Palaeococcus pacificus: PAP_04165
Entry
PAP_04165         CDS       T03210                                 
Name
(GenBank) hypothetical protein
  KO
K04800  replication factor C large subunit
Organism
ppac  Palaeococcus pacificus
Pathway
ppac03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAP_04165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppac03032]
    PAP_04165
DNA replication proteins [BR:ppac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PAP_04165
SSDB
Motif
Pfam: AAA Rad17 RCF1-5-like_lid RuvB_N AAA_14 AAA_22 nSTAND3 AAA_assoc_2 DUF815 PPV_E1_C DNA_pol3_delta2 AAA_5 AAA_16 AAA_11 AAA_28 AAA_25 AAA_24 TIP49 AAA_18 IstB_IS21 AAA_7 IPT AAA_33 AAA_17 Parvo_NS1 RNA_helicase NPHP3_N Zeta_toxin TsaE AAA_6 ResIII AAA_30 DNAX_ATPase_lid SWIB DUF553 UBA_Rad5 Hydin_ADK
Other DBs
NCBI-ProteinID: AIF69248
UniProt: A0A075LXH1
LinkDB
Position
complement(721756..723222)
AA seq 488 aa
MLPWVEKYRPKRLSELVNQEKALPKVKAWVEEWLKGRPKKKAILLYGPPGVGKTATAYAL
ANEYGFEVIELNASDERTYEKVSRYIQAAYTMDVFGRKRKLIFMDEADNMEPSGAYEIAK
LIEKARNPIILSANKYWQVPQAIRSKAELIEYKKLTQRDIMAGLWRIVKAEHLEVPKEVI
KLIAQRANGDLRAAINDLQTVAVSPEDAEQLLAYRDVEKSVFQALGGIFASDSTKKARMA
MWNVDKTPDELLLWIDENIPYIYTKPEEIAQAYEAISRADIYFGRANRSGNYGLWKYAID
MMTAGVAVAGTKKKGFLRFYPPKTLKILRDSKEERGIRDSIIRKIMKGMHMSKLEAIETM
AIFKGIFQYNPEKAAHIAVFLELGDKEIEFLTEDKEKAKSIKGKMMVIHKELKKTEPGEE
VKVEKEEKEQEKVKEVEETQETVGKKEPKEPKKEIEEEKPKEEEKSEETAKEEKKPKQAT
LFDFIKKK
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgctaccatgggtggaaaagtaccgtccaaaacggctcagtgaacttgtgaatcaagag
aaagccctccccaaggttaaggcttgggtagaagagtggctaaaggggagacctaaaaag
aaagccatcctcctatacggtcctccgggagtaggaaaaaccgctacagcttatgctttg
gctaatgaatatggatttgaggttatagagcttaacgcaagtgatgagaggacttacgaa
aaggtgagccgatacatccaagcggcatatacaatggacgtctttggacgaaaaaggaag
cttattttcatggatgaagccgacaacatggagccaagcggggcatatgagatagccaag
cttatagagaaagcgaggaatccaataatactctctgcgaacaagtattggcaagtcccc
caagccattagaagcaaagcagagctcatcgaatacaaaaagctcactcaaagggatatt
atggccggactgtggcgcattgttaaggccgagcatcttgaggtgccaaaggaagttata
aagctaatagcccaaagggcgaacggtgatttaagggccgctattaatgatttgcagaca
gtagcagttagtcccgaggatgcagagcagcttttggcttatagagatgttgaaaagagc
gttttccaagcattaggtggaatattcgcaagcgacagcaccaaaaaagcgaggatggca
atgtggaacgtggacaaaacaccagatgagcttttgctttggatagatgagaacatcccc
tacatatacactaagcccgaagagatagcccaagcttacgaagccataagcagggccgat
atatactttggaagagccaataggagcgggaactacggcctttggaaatacgctatagat
atgatgacagcgggggtagctgttgcgggcaccaagaaaaagggctttttgaggttttat
ccaccgaagacacttaagatactccgtgattccaaggaagagcgcgggattagggattca
ataatcaggaagattatgaaagggatgcacatgagcaagctggaggctattgagacgatg
gctattttcaaaggaatattccagtacaatccagaaaaagccgcacacattgctgttttc
ttagagcttggagacaaagaaattgagtttttaacggaagataaagaaaaggccaagagc
ataaagggcaaaatgatggtcatacataaagagctcaaaaaaaccgagccgggagaggag
gtaaaagtcgagaaagaggaaaaagagcaagaaaaagtcaaagaagtcgaggaaacccaa
gagaccgtaggaaagaaagagcctaaagagcccaaaaaggagattgaggaagaaaaaccc
aaagaagaggaaaaaagcgaagaaacagcaaaagaagaaaagaagccaaagcaggccacg
ctctttgacttcatcaagaagaagtga

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