KEGG   Palaeococcus pacificus: PAP_04170
Entry
PAP_04170         CDS       T03210                                 
Name
(GenBank) clamp loader protein
  KO
K04801  replication factor C small subunit
Organism
ppac  Palaeococcus pacificus
Pathway
ppac03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAP_04170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppac03032]
    PAP_04170
DNA replication proteins [BR:ppac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PAP_04170
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N Rad17 RCF1-5-like_lid AAA_14 Mg_chelatase AAA_16 AAA_assoc_2 AAA_3 nSTAND3 AAA_18 AAA_22 ResIII AAA_24 AAA_25 AAA_5 AAA_2 TIP49 TPR_7 AAA_17 IstB_IS21 DNAX_ATPase_lid Viral_helicase1 HVO_0513_N AAA_7 AAA_28 AAA_11 RNA_helicase FtsK_SpoIIIE UBA_Rad5
Other DBs
NCBI-ProteinID: AIF68447
UniProt: A0A075LR41
LinkDB
Position
complement(723236..724213)
AA seq 325 aa
MSEVKEVKILEKPWVEKYRPEKLNDIVGQEHIVKRLTHYVKTSSMPHLLFAGPPGVGKTT
AALCLAKEIYGEHWRQNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDESDA
LTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDEDVAKRLRYI
AENEGLELTEDGLQALLYVAEGDMRRAINVLQAAAALDTKITDENVFIVASRARPEDVRE
MMVLALEGNFLKARDKLREILLKQGLSGEDVLIQMHKEVFNLPISEPKKVKLADKIGEYN
FRLVEGAHEMIQLEALLAQFTLLGK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagtgaagtcaaagaagttaaaatccttgaaaaaccgtgggttgagaagtacaggcct
gaaaagctcaacgatatcgtaggtcaagagcacatagtcaagaggttaacgcattatgtt
aaaacaagttccatgccccatcttttattcgccgggccccccggtgttggaaagacaact
gcagctttatgcttagctaaagagatatacggcgagcactggaggcagaactttttagag
ctaaatgccagcgatgaaagaggtattaatgttattagagaaaaagtaaaagagtttgcg
cgcactaaacctattggaggggcaagctttaagataatctttctcgatgagagtgacgct
ttaacacaggacgcccagcaagccttaaggagaaccatggagatgttctcgaacaacgtt
cgcttcatcttaagctgtaactactcctcaaagattatagagcctatacaaagcagatgc
gctatttttaggtttaggcccctcaacgacgaggacgtcgcgaagcgcttgaggtatata
gctgagaacgaaggacttgaacttacagaagacggtcttcaagcactcctctacgttgcc
gaaggcgatatgagaagggcaataaacgttctccaagctgctgctgcattggacactaaa
ataactgatgaaaacgtctttatcgttgcaagcagggctaggccagaggacgttagagag
atgatggtgctcgctttagagggcaacttccttaaggcaagggacaagctcagggaaata
ctcctcaagcagggcttaagcggagaggatgttctaattcagatgcataaggaagtgttt
aacttgccaataagcgaacccaagaaggttaagctcgcggataaaataggtgagtacaac
tttaggcttgttgaaggggcgcacgagatgattcagcttgaagcccttttggcgcagttc
acgcttttggggaagtaa

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