Palaeococcus pacificus: PAP_05285
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Entry
PAP_05285 CDS
T03210
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAP_05285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppac03000
]
PAP_05285
03021 Transcription machinery [BR:
ppac03021
]
PAP_05285
Transcription factors [BR:
ppac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PAP_05285
Transcription machinery [BR:
ppac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PAP_05285
RNA polymerase III system
TFIIIB
PAP_05285
RNA polymerase I system
SL1/TIF-1B
PAP_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Marek_SORF3
Motif
Other DBs
NCBI-ProteinID:
AIF69466
UniProt:
A0A075LTM0
LinkDB
All DBs
Position
complement(944586..945146)
Genome browser
AA seq
186 aa
AA seq
DB search
MSKVKLRIENIVASVDLFTSLDLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLVFSSG
KLVVTGAKSVEDIEGAVSKLVGMLSKIGAKFQRAPQIDIQNMVFSGDIGMEFNLDAVALA
LPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGAKSEHDAWEAVKKLLHELEKYGL
TESWEF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtaaagctaagaattgagaatatcgttgcctctgtggacttgttcacttct
ttggatttggaaaaagtaatagagatttgcccgaactctaagtacaatcccgaagagttc
cccggaattatttgccgctttgacgagccaaaagttgctcttctcgttttcagctcagga
aagctggtcgttactggagctaagagtgttgaagacattgaaggtgcagtttcaaagctc
gttggaatgctctcaaagattggagcaaagttccaaagggcacctcaaatagacattcaa
aacatggtgtttagcggtgacattggtatggagtttaacctcgatgccgttgctttggcc
cttccaaactgtgagtacgaaccagagcagttccccggcgttatttatagggtaaaagac
ccgagagctgttatcttgctattcagctccggtaaaatcgtgtgcagtggcgctaaaagc
gaacacgacgcctgggaagctgttaaaaagttgctccacgagcttgagaagtacggacta
acagagagctgggagttctaa
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