Palaeococcus pacificus: PAP_06615
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Entry
PAP_06615 CDS
T03210
Name
(GenBank) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppac03016
]
PAP_06615
Enzymes [BR:
ppac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PAP_06615
Transfer RNA biogenesis [BR:
ppac03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
PAP_06615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM
UPF0004
TRAM_2
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
AIF69719
UniProt:
A0A075LTN2
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All DBs
Position
complement(1187056..1188264)
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AA seq
402 aa
AA seq
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MEALLLNAGYEISDLDSADYVIVNTCAVKDPTEHHMSRRIKELLDGGKRVIVTGCLPHIN
PKVIDERVSAILGVKSIDRIGDAIRLAEEGEKLISIEQRSVDKLELPRIWKSSVAFVVPI
SEGCLNACTYCGTRFARGVLKSYAPEKVVKWVKEALARGYKEIQLSSEDTGCYGFDIGTN
LAELLDEITAIEGEFRVRVGMMNPNHVIKFLDELVDVYKDEKIYKFLHLPVQSGDNEILR
LMARTYTVEEFEEIVGAFRRKIPGLNLNTDIIVGFPGETEEAFQNTVALIERVRPDKINV
SRFSPRPGTLAAKMKNQVVGWRAKERSRYLHRLRLSISYEINKKLVGRELEVLTHGQGQK
GGIEGRTMNYKDIILPGAPVGEFVKVKVTKATATYLMGELVE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaagccctcttgcttaacgcgggctatgaaattagtgatttggatagtgcggactat
gtaatcgttaatacctgcgccgtcaaagatcctacggagcatcacatgagcagaaggatt
aaagagctcttagatggcggaaagagagttatcgttacaggctgtttgccccacattaac
cctaaagttatcgatgagagagtttccgcaattttgggggttaagagcatagatagaata
ggggatgcaattagacttgcggaagagggagaaaagctgatttccatagaacagaggagc
gtagataagctcgagctccccagaatttggaaaagcagtgttgcatttgtagttcctatc
agcgaaggctgcttaaacgcgtgcacctactgtggaacgcgctttgcgagaggtgttttg
aagagctatgccccggaaaaggtggttaagtgggttaaggaagctttagctagaggctat
aaagaaatccagctaagctcagaggataccggatgctacggctttgatataggaaccaac
ttagcggagcttttagatgaaattactgccattgagggcgagtttagggtcagggtaggc
atgatgaacccaaaccatgtaataaagttcctcgatgagctagtggatgtatataaagac
gaaaaaatctacaagttcctccacctccctgtgcagagcggagataatgaaattttgagg
ctcatggcgaggacgtacaccgttgaggagtttgaagagatagttggagcatttaggagg
aaaatcccggggcttaacttaaacaccgacattatagtcggcttccccggtgagacggag
gaggcttttcaaaataccgttgctctcattgagagggttaggccagacaagataaacgtc
tcacgcttctcaccgaggcccggaactttagcggctaagatgaaaaatcaggtggttggg
tggagggctaaagagcgctctcgctatttgcaccgcctgcgtttgagcataagctatgaa
attaacaaaaagctcgttggacgagaattggaagtcctaacgcacggccaaggacaaaaa
ggcggaattgaaggaaggactatgaactacaaagacataatccttccaggggcaccagtg
ggcgagttcgttaaagtgaaggtcacaaaggcaacggcgacctatttgatgggcgagctc
gtggaataa
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