KEGG   Palaeococcus pacificus: PAP_07725
Entry
PAP_07725         CDS       T03210                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ppac  Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:ppac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppac03400]
    PAP_07725
DNA repair and recombination proteins [BR:ppac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PAP_07725
    Archaeal homologous recombinant proteins
     PAP_07725
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_21 Rad50_zn_hook AAA_15 AAA_29 EzrA DUF3450 SbcC_Walker_B AAA_16 Baculo_PEP_C DEAD
Other DBs
NCBI-ProteinID: AIF69934
UniProt: A0A075LU85
LinkDB
Position
complement(1378440..1381106)
AA seq 888 aa
MRIRALAIKDFRAHEKSYVEFNDGINLVIGQNGSGKSSILEAIFASFYLGHGSFPRGYKK
VNTRVDSKSGFELTLKFEHGGKMYEIVRKSLGESYLKENGSIIADKDSDIARWVERYLYP
IHVYRNALYIRQGEIESILTDEDVREKVLRKVLGIEDYENAEKNAQEVIRELRREKEHLE
GVILGAGDVKSQIEDAERKLKEVFKSINELRLLEGELKEKFKAVSSRYSQLKNTKELLEE
LEREEIRKEGELNEIKESITHLEERIKELQQEIQDLKGKEKRLKEIEWVNKRYPKLKSVL
SKKDDLHKAKIEMSRLEQKLKNIGEQIEELKEKEKELQIKREEYTKAIKTYNELKRSVEQ
YEKAMQLLAQKERHEMELKKEGYTKEKLLSEIEGVNKAKEKAKEVDEEIIKIREEISGLN
KLEHSLRQNLSKLEGAKECPLCKRPMEEHDEEEIMREYREEFAQIEKRRKELKEKLKELT
EEKKQLESIKATEGKLLKLQKTLELLEEVEKELKGYDVEKLKKKADEFEEVKRKAIELKK
EMTSINRELEKLEKLMMEKERAENEMKALNARVNRILNELSKEGFSSFEDVEEELERIDP
IYREYLQLKGIPSELSLKEKRKRILEEKMGLKIKGLEKLKKELQEIKAKVQKLKKEFSKE
EFERVENEYLNLSNKVASIKAEIEGQERLKEEVTKRLEGLRKQLEEVKSAQAKIKAVEKV
MADMKVLREKLIKFKAEAERRGLEEVEKVASELFSEMTERKYQGIKIIREKRYGKERIRI
AVLYQGEEQGIDFLSGGERIALGLSFRLALSLYKVRNLELLILDEPTPFLDEERRKKLID
IITQHLRKIPQVIIVSHDEELKDAADYVIRVSLVGGKSRVEVESLAAY
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgaggattagagcactcgccataaaggattttagggctcatgaaaagtcttacgtggaa
tttaacgatggtataaacttagtaattggacaaaacggttctggaaagagctctattctt
gaggccatatttgcctcgttctacctcggccatgggagcttcccgaggggatataagaaa
gttaacaccagggtggactccaagtctggctttgagcttacattaaaatttgaacatggg
ggaaagatgtatgaaattgtgagaaagtcccttggagagagctatcttaaagaaaatggc
agcataattgcggacaaagacagcgatatagcgagatgggtggagcgctatttgtatcca
atccatgtttatagaaatgccctctatatcagacagggagagattgagagcattttaacg
gatgaagatgtgagagagaaggttttgaggaaagtccttggaattgaggactacgaaaac
gccgagaaaaatgctcaagaggttataagagagctgaggagagagaaagaacacttggag
ggcgtcatactgggagcgggagatgtaaaatctcaaatagaagacgctgaaagaaagctc
aaggaagtatttaaatctatcaatgagcttagacttttggaaggagaacttaaggagaag
ttcaaagcagtatcctccagatactcccagcttaaaaacactaaagaacttctcgaagaa
cttgaaagagaggagatcaggaaagaaggagagctcaacgagataaaagagtccataacc
catctcgaagagagaataaaagagctccaacaagagatccaagacctcaaggggaaagag
aagaggcttaaggagattgagtgggttaacaagagatatcccaaactcaaatctgttcta
tctaaaaaagatgaccttcacaaggccaaaattgagatgtctcgtctagaacaaaagctt
aagaatattggggagcagattgaggagcttaaagaaaaggagaaagagctccagataaag
agagaggaatataccaaagcaattaaaacatacaacgagttaaaacgctccgttgagcag
tatgagaaggccatgcagcttttagctcagaaagaaaggcatgagatggaacttaaaaaa
gagggatacactaaagaaaagcttctcagcgagattgaaggggtcaacaaagctaaagaa
aaggcaaaggaagttgatgaagaaataattaagataagagaagaaatcagcggcttaaac
aagcttgagcacagcttaagacaaaacctctcaaagcttgaaggagcgaaggagtgtcca
ctgtgtaagaggcctatggaagagcacgatgaagaggaaataatgcgtgagtatagagag
gagttcgcacagattgagaaaaggagaaaagaactcaaagaaaaactaaaagagctcact
gaagagaagaaacaactcgaaagtatcaaggcaactgaaggaaagcttctaaagctccaa
aaaacactcgaacttctcgaagaagttgaaaaagagctgaaaggctacgacgttgaaaag
ctaaagaaaaaagctgatgaattcgaagaggtcaagagaaaggccattgaactcaagaag
gagatgaccagcattaacagagagctcgaaaagctggaaaagcttatgatggaaaaagag
agagctgaaaatgagatgaaggctctgaatgcgagagtaaaccggatattgaatgagctc
tctaaagagggcttctcgtcatttgaagatgttgaggaggagcttgaacggattgacccc
atttacagagagtatcttcaactaaagggcattccttctgaactgagcttaaaggaaaag
agaaagagaatcctcgaggagaaaatggggctgaagattaagggactggaaaagctcaaa
aaagagctccaagagattaaagcaaaagttcaaaagcttaaaaaagagttctcaaaggaa
gagtttgagagagttgaaaatgagtacttgaatctctcaaacaaagttgccagcattaaa
gcagaaattgagggccaggaaagacttaaagaagaagtaacaaaacgtttagaaggttta
aggaagcagcttgaggaggttaagagcgctcaagcaaagataaaggcagtagaaaaggtc
atggccgatatgaaagtgctgagagagaagttaatcaaattcaaggctgaagcggaacgc
aggggacttgaggaagttgaaaaagttgcgagcgagttgttctcggaaatgacggaaagg
aagtaccagggcattaagataatccgcgagaagaggtatggtaaggagaggattaggata
gcagttttataccaaggtgaagagcagggcattgattttttaagtggaggcgagaggata
gctctcggtctttcatttaggttggcactgtcgctctacaaagtcagaaacctcgagctc
ctcattttggacgagccgacgcctttcttagacgaagagagaagaaagaagctcatagac
ataataacgcagcacttgaggaaaataccgcaggttataatagtgtctcatgacgaggag
cttaaagatgcagcggattacgtgattagggtttcgttagttggtggaaagagcagggta
gaggtggagagtcttgccgcgtattag

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