Palaeococcus pacificus: PAP_07725
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Entry
PAP_07725 CDS
T03210
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppac03400
]
PAP_07725
DNA repair and recombination proteins [BR:
ppac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAP_07725
Archaeal homologous recombinant proteins
PAP_07725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
Rad50_zn_hook
AAA_15
AAA_29
EzrA
DUF3450
SbcC_Walker_B
AAA_16
Baculo_PEP_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIF69934
UniProt:
A0A075LU85
LinkDB
All DBs
Position
complement(1378440..1381106)
Genome browser
AA seq
888 aa
AA seq
DB search
MRIRALAIKDFRAHEKSYVEFNDGINLVIGQNGSGKSSILEAIFASFYLGHGSFPRGYKK
VNTRVDSKSGFELTLKFEHGGKMYEIVRKSLGESYLKENGSIIADKDSDIARWVERYLYP
IHVYRNALYIRQGEIESILTDEDVREKVLRKVLGIEDYENAEKNAQEVIRELRREKEHLE
GVILGAGDVKSQIEDAERKLKEVFKSINELRLLEGELKEKFKAVSSRYSQLKNTKELLEE
LEREEIRKEGELNEIKESITHLEERIKELQQEIQDLKGKEKRLKEIEWVNKRYPKLKSVL
SKKDDLHKAKIEMSRLEQKLKNIGEQIEELKEKEKELQIKREEYTKAIKTYNELKRSVEQ
YEKAMQLLAQKERHEMELKKEGYTKEKLLSEIEGVNKAKEKAKEVDEEIIKIREEISGLN
KLEHSLRQNLSKLEGAKECPLCKRPMEEHDEEEIMREYREEFAQIEKRRKELKEKLKELT
EEKKQLESIKATEGKLLKLQKTLELLEEVEKELKGYDVEKLKKKADEFEEVKRKAIELKK
EMTSINRELEKLEKLMMEKERAENEMKALNARVNRILNELSKEGFSSFEDVEEELERIDP
IYREYLQLKGIPSELSLKEKRKRILEEKMGLKIKGLEKLKKELQEIKAKVQKLKKEFSKE
EFERVENEYLNLSNKVASIKAEIEGQERLKEEVTKRLEGLRKQLEEVKSAQAKIKAVEKV
MADMKVLREKLIKFKAEAERRGLEEVEKVASELFSEMTERKYQGIKIIREKRYGKERIRI
AVLYQGEEQGIDFLSGGERIALGLSFRLALSLYKVRNLELLILDEPTPFLDEERRKKLID
IITQHLRKIPQVIIVSHDEELKDAADYVIRVSLVGGKSRVEVESLAAY
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaggattagagcactcgccataaaggattttagggctcatgaaaagtcttacgtggaa
tttaacgatggtataaacttagtaattggacaaaacggttctggaaagagctctattctt
gaggccatatttgcctcgttctacctcggccatgggagcttcccgaggggatataagaaa
gttaacaccagggtggactccaagtctggctttgagcttacattaaaatttgaacatggg
ggaaagatgtatgaaattgtgagaaagtcccttggagagagctatcttaaagaaaatggc
agcataattgcggacaaagacagcgatatagcgagatgggtggagcgctatttgtatcca
atccatgtttatagaaatgccctctatatcagacagggagagattgagagcattttaacg
gatgaagatgtgagagagaaggttttgaggaaagtccttggaattgaggactacgaaaac
gccgagaaaaatgctcaagaggttataagagagctgaggagagagaaagaacacttggag
ggcgtcatactgggagcgggagatgtaaaatctcaaatagaagacgctgaaagaaagctc
aaggaagtatttaaatctatcaatgagcttagacttttggaaggagaacttaaggagaag
ttcaaagcagtatcctccagatactcccagcttaaaaacactaaagaacttctcgaagaa
cttgaaagagaggagatcaggaaagaaggagagctcaacgagataaaagagtccataacc
catctcgaagagagaataaaagagctccaacaagagatccaagacctcaaggggaaagag
aagaggcttaaggagattgagtgggttaacaagagatatcccaaactcaaatctgttcta
tctaaaaaagatgaccttcacaaggccaaaattgagatgtctcgtctagaacaaaagctt
aagaatattggggagcagattgaggagcttaaagaaaaggagaaagagctccagataaag
agagaggaatataccaaagcaattaaaacatacaacgagttaaaacgctccgttgagcag
tatgagaaggccatgcagcttttagctcagaaagaaaggcatgagatggaacttaaaaaa
gagggatacactaaagaaaagcttctcagcgagattgaaggggtcaacaaagctaaagaa
aaggcaaaggaagttgatgaagaaataattaagataagagaagaaatcagcggcttaaac
aagcttgagcacagcttaagacaaaacctctcaaagcttgaaggagcgaaggagtgtcca
ctgtgtaagaggcctatggaagagcacgatgaagaggaaataatgcgtgagtatagagag
gagttcgcacagattgagaaaaggagaaaagaactcaaagaaaaactaaaagagctcact
gaagagaagaaacaactcgaaagtatcaaggcaactgaaggaaagcttctaaagctccaa
aaaacactcgaacttctcgaagaagttgaaaaagagctgaaaggctacgacgttgaaaag
ctaaagaaaaaagctgatgaattcgaagaggtcaagagaaaggccattgaactcaagaag
gagatgaccagcattaacagagagctcgaaaagctggaaaagcttatgatggaaaaagag
agagctgaaaatgagatgaaggctctgaatgcgagagtaaaccggatattgaatgagctc
tctaaagagggcttctcgtcatttgaagatgttgaggaggagcttgaacggattgacccc
atttacagagagtatcttcaactaaagggcattccttctgaactgagcttaaaggaaaag
agaaagagaatcctcgaggagaaaatggggctgaagattaagggactggaaaagctcaaa
aaagagctccaagagattaaagcaaaagttcaaaagcttaaaaaagagttctcaaaggaa
gagtttgagagagttgaaaatgagtacttgaatctctcaaacaaagttgccagcattaaa
gcagaaattgagggccaggaaagacttaaagaagaagtaacaaaacgtttagaaggttta
aggaagcagcttgaggaggttaagagcgctcaagcaaagataaaggcagtagaaaaggtc
atggccgatatgaaagtgctgagagagaagttaatcaaattcaaggctgaagcggaacgc
aggggacttgaggaagttgaaaaagttgcgagcgagttgttctcggaaatgacggaaagg
aagtaccagggcattaagataatccgcgagaagaggtatggtaaggagaggattaggata
gcagttttataccaaggtgaagagcagggcattgattttttaagtggaggcgagaggata
gctctcggtctttcatttaggttggcactgtcgctctacaaagtcagaaacctcgagctc
ctcattttggacgagccgacgcctttcttagacgaagagagaagaaagaagctcatagac
ataataacgcagcacttgaggaaaataccgcaggttataatagtgtctcatgacgaggag
cttaaagatgcagcggattacgtgattagggtttcgttagttggtggaaagagcagggta
gaggtggagagtcttgccgcgtattag
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