Palaeococcus pacificus: PAP_07735
Help
Entry
PAP_07735 CDS
T03210
Name
(GenBank) DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppac03400
]
PAP_07735
DNA repair and recombination proteins [BR:
ppac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PAP_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AIF69936
UniProt:
A0A075LUX5
LinkDB
All DBs
Position
complement(1382457..1384127)
Genome browser
AA seq
556 aa
AA seq
DB search
MEDKVGIVYGESSTDYFTFIVDPKNMPNFGEFVVVKNRNGEEVLAVVKSVKNINWLMSAG
RGSYDYIEKTVTIFSKGVLDKSESIIASAKVLGVLKTKEDIESGDFEFRQIPNRVPIKPG
EVVKLADNDDLKKIFSNGHIRIGRLLARADVEVGLDVDRLVSRHFAVLAVTGAGKSNTIA
VLTKEIIDKTRGTIVILDPHGEYSSLTWKNARVNPIKATIDPSKITISEFATLLGIAENA
SLQRRFLSLAYHTVKWEAKNQAKVLGGLSFVEALEDQIEEWIRTYENKSKGEEAFIDYYD
SQGRVLQRKIQARDLDSLIRIKDYLQELKANFGEFIKLGNVLSEIVPGMANIIDLSGMEE
DQMIALASYLLRGVLKYRVQYMKALRTNDAATLKMIREKFPALTKPLLLVIEEAHIFAPR
GEKTQASHWLGKIAREGRKFGIGLGIVSQRPKKLDDDILSQTNTKIILRLVEPHDQKYVQ
QASEQISEDLLMDIASLGIGEAVIVGYAISLPAMVKIYSFKDEFKGYYGGGDIDIVKEWS
EGEEREDFDLADFAGE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagttggcatagtctatggagaatccagcacagactacttcacatttata
gttgatccaaagaacatgcccaattttggagagtttgttgtggttaaaaataggaacggt
gaagaggtattagctgtcgttaagagtgtgaaaaacatcaactggcttatgagtgcggga
agagggagctacgactacatagaaaagacagttacaattttttctaagggtgttttggat
aagagcgagtcgataatagcaagcgccaaggttttaggggttctaaaaaccaaagaggac
attgagagtggggattttgaatttaggcagataccaaatagagtcccaataaagcccgga
gaagttgttaaacttgcagataatgatgatttgaagaagattttctcaaatgggcacatt
aggataggaaggctcttggctagagctgatgttgaagttgggctggatgtggataggctc
gtctctaggcactttgccgtcttagctgttacgggagcaggaaagtccaatacaatagca
gttctaacaaaagaaattattgacaagacgagggggactatagtcattttagaccctcat
ggggagtactcatccctaacttggaaaaacgctagagtaaaccccataaaggccacgata
gacccctctaaaatcactatcagcgagtttgcaactcttttagggatagcggagaatgcc
tcactccagaggcgctttttgagcttagcttaccacacagttaaatgggaggctaaaaac
caagctaaagtgctgggtgggctgtcatttgtagaggctctcgaagaccaaattgaagag
tggataaggacttatgagaataaatcaaaaggagaagaagcttttattgattattatgac
tcacagggaagggttctccaaagaaagatacaggcgagagacttggattcactgattagg
ataaaagactacctccaagagcttaaagcaaactttggtgagttcataaagcttggaaac
gttctatccgagatagtcccaggaatggcaaacatcatagacctgagcggtatggaagag
gatcaaatgattgctttagcttcctatctccttaggggagttctaaaataccgcgtccag
tatatgaaggcccttaggacgaacgatgctgctacactaaaaatgataagagaaaagttc
cctgctctgacaaagcccctcctcttggtcatagaggaagcccacatattcgctcctaga
ggtgaaaagacgcaagcatcccactggttaggcaaaatagctagagaaggaagaaagttc
ggtataggacttggaattgtttcacaaaggcccaaaaagctcgacgatgatattttaagc
cagacgaacacaaagataatcctccgcttggttgagccccatgaccaaaaatacgtccag
caggcgagcgagcagataagtgaggatttacttatggacatagcttccttgggaataggt
gaagcagttatagtcggctacgccatttctcttcccgctatggtcaagatatacagcttt
aaagatgagttcaagggctactacggcggcggtgacatagatattgttaaggaatggagc
gaaggtgaagaaagagaggattttgatttagcagactttgctggtgagtga
DBGET
integrated database retrieval system
