KEGG   Palaeococcus pacificus: PAP_07955
Entry
PAP_07955         CDS       T03210                                 
Name
(GenBank) RNA helicase
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ppac  Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:ppac00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppac02048]
    PAP_07955
Enzymes [BR:ppac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PAP_07955
Prokaryotic defense system [BR:ppac02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PAP_07955
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII HD Se_S_carrier Ribosomal_L1 Pept_S41_N AAA_22
Other DBs
NCBI-ProteinID: AIF69980
UniProt: A0A075LT89
LinkDB
Position
complement(1430839..1433037)
AA seq 732 aa
MAKFNPNDFLECHTNDVLNVLKSMKSAFPWIPKLSRDDIWELLFYSILLHDIGKCAIGFQ
KAGAKGKIWGYRHEVLSAAFTQFLDYDAETKNLIALAILTHHRYLSELPVPTRVEEFVWD
GYLEKVNELLKNADYIEEVFLPKVPYWEGYILGKRSGKFKLPSDWKNKLKGYDFDDLMNW
YERNCKAHRDVLIFLKGLLNAADHLASAGEISLRSLPFIAETLELKIPREKWRPLQEKAN
NVRGNLLLRAPTGYGKTEAALLWADANAYRQKKGISNRIFYVLPYKASINAMHERLLSYF
KSPELVGILHSSSNYYLYSSSLEYKRLSSLYQKIFTPFKVTTPFQIMKAFFGVGFFEMTL
SELANSLLIFDEIHAYEPNVLGIILAMLEILNGYGSRTMIMSATLPSFIEELFAEVISPK
ELKVSNEEADRFTRHRVRIIEGNMEENLEELAEQFKANGLMPALIACNTVDRAMETYKRL
KAKGYRVMLIHSRFTYGDREELERKLRSNLNGYDFVVATQVIEVSLDISFKTILTEPAPL
DALIQRFGRVNRQGWKQGKIADVHILTRGSEKDEKVYKPYRIVRQSVKILEELNEDFLWE
SSIPELVSEAYSSVEKELVESVLDYKQTAFDLFDGLQPLKRSGSEQEFYKMFQGLEIIPS
RFAGEVSKLIDAGKGIEVHRYLVPIPYWKLFAIQKELGNVFTYDKKHRMMIANLKYSHKL
GLLNESEENEIF
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggcgaagtttaatccaaacgacttccttgagtgccacaccaacgacgtccttaacgtc
ctcaaaagcatgaagagtgcattcccatggattccaaaactctcgcgcgatgacatctgg
gagcttctcttttattctatccttctccacgacataggcaagtgtgctataggatttcag
aaggctggggcaaagggcaaaatttggggctatcgccatgaagttctttcagcagctttt
actcaatttctagattatgatgcagagacaaagaatttaatcgcactcgcgattctaacg
catcaccgttatctcagcgagttgcctgttcccacgagggtagaggagttcgtctgggat
ggttacttggagaaagtcaatgaactactcaaaaacgcggattacattgaggaagttttc
ctcccaaaggtaccctattgggaagggtatattcttggaaaaagatctgggaagtttaaa
cttccatctgattggaagaataagctcaaaggatacgactttgatgatttaatgaactgg
tacgagagaaattgtaaagctcacagagatgttctaatatttctcaaaggcctactgaat
gctgcagatcatttggcatctgcaggtgagatatctttgagatcactcccttttatagcc
gagacattagaactgaagataccacgagagaagtggaggccacttcaagaaaaagcgaat
aatgtgagaggaaatctccttttacgtgccccaactggttatggaaaaactgaagccgct
cttttgtgggcagatgcaaatgcttacagacaaaagaaagggatttcgaatagaatcttt
tacgttcttccatataaggccagcatcaacgcgatgcacgagcgccttcttagttatttc
aagagtccagaactcgttggaattcttcacagctcgtcgaactattacctatattcctca
agccttgagtacaagcgtctctcgagtctctaccaaaaaatattcacccccttcaaggtt
acgacaccattccaaataatgaaagccttctttggcgttggctttttcgagatgacgctg
agcgagctggctaactcccttctaatcttcgatgaaatccacgcctacgagcccaatgtc
ctggggataattcttgcaatgctcgaaatcctgaatggttatggatcaagaacgatgata
atgtcggcaacgctcccatccttcatcgaggagctttttgcagaggtgatatctccaaaa
gagcttaaagtctctaacgaagaagccgaccgcttcacgaggcatagagttagaataatc
gaaggcaatatggaagaaaatctcgaagagcttgcagagcagtttaaggctaatgggtta
atgccagccttgatagcttgcaacactgtcgatagagctatggaaacatacaagcggctt
aaggctaagggataccgtgtcatgcttatccacagccgcttcacttatggtgatagggag
gaactcgaaagaaagttgaggagcaacctcaatgggtacgattttgtggttgccactcag
gtcatagaggtttcccttgatataagcttcaagacaatcctaactgagccagctcccctc
gacgcccttattcagcgttttggaagagtgaacagacaggggtggaagcagggaaagatt
gcagacgtgcatatcctaactaggggctccgaaaaggatgagaaagtttacaagccttac
aggattgtgaggcagagcgttaagattttggaggagttgaatgaagacttcttgtgggaa
tcctcaattccagaacttgttagtgaggcatactccagtgtggaaaaggagctagttgag
agtgtgttagactataagcagactgcttttgacctctttgacgggcttcagcctttgaag
aggagcggaagtgagcaggaattttacaaaatgttccaaggacttgagattattccctca
aggtttgctggagaagtgagtaagctcatcgatgctggtaagggaattgaggttcaccgc
taccttgttcccattccttattggaagctcttcgcaattcaaaaggagctcggcaatgtc
ttcacatatgataaaaagcaccgcatgatgattgccaatctgaagtatagccacaagctc
ggtcttttgaacgaatcggaggagaatgagatattttga

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