Palaeococcus pacificus: PAP_09740
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Entry
PAP_09740 CDS
T03210
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppac03016
]
PAP_09740
Enzymes [BR:
ppac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PAP_09740
Transfer RNA biogenesis [BR:
ppac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PAP_09740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
RBFA
Motif
Other DBs
NCBI-ProteinID:
AIF70323
UniProt:
A0A075M0M2
LinkDB
All DBs
Position
complement(1756604..1757158)
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AA seq
184 aa
AA seq
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MRAFIAIEINDAVRENLVKAQDKIERAKAAKIKFVEPENLHLTIKFLGEITEEQAKEIGE
ILEGIAKKYRKHSVKVKGIGVFPSYNYIRVIWAGLEGDEEIKKIAQDVENAMRKLGFKKD
KEFVSHITIGRVKYVRDKVELMLTLKELVNEDFGEFTVEAIELRKSTLTPKGPIYETIKR
VDLG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagagctttcatagcaattgagattaacgatgcggttagagaaaacctcgttaaagcg
caggataagattgagcgtgctaaggcagctaagataaagttcgttgagccggaaaacctg
catttaacgattaagtttttgggggagattacagaggagcaggcaaaggagataggcgag
attttggagggtatagctaaaaaatacaggaagcacagcgttaaggttaagggtataggc
gttttcccaagctacaactacatccgcgttatatgggcgggcttagagggagatgaggaa
atcaaaaaaattgctcaggacgttgaaaacgccatgaggaagctcggcttcaaaaaggac
aaggagtttgtgtcgcacataacgattggaagggtaaagtacgtcagggacaaggtcgag
ctcatgctcactttaaaggagcttgtcaatgaggacttcggtgaattcacagttgaagct
atagagctcaggaagagcactctaacgcccaagggtccgatttacgagacgataaagcgt
gttgatttaggttga
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