Panthera pardus (leopard): 109245389
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Entry
109245389 CDS
T06062
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ppad
Panthera pardus (leopard)
Pathway
ppad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109245389 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppad03019
]
109245389 (PNLDC1)
Enzymes [BR:
ppad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109245389 (PNLDC1)
Messenger RNA biogenesis [BR:
ppad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109245389 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109245389
NCBI-ProteinID:
XP_019268250
Ensembl:
ENSPPRG00000012854
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLGADFVGLDIEFTGLRSNQSRPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGVLDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILTGNWKVRSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGIAGFQAFEIQLVLRQALPNIWTVLRDQGIIVKKVSKQHRWYLENTSCDRESCWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMTDLLHLHEKFFRPLPESYDQFKLNIHSLFPV
LIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIIHASKCEKYAETKYPH
EAAYDAFLCGSVLLKVAHLLLWRVHGAGSLPELSFPLYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILLLSVRRWPGVSEQQVYREFQNLCKFDVRRLSRSQFLLLTNKFKDAR
SILREYRGHPTLQISLYRYWRHSPDINCLLQICGVVATWALLALVLGRPDP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagagcctccctctgctgcaggagctcgtcctg
ggcgcggacttcgtgggtctggacatagagttcacgggccttcgttctaaccagtcccgg
ccccagcagatcagcctgttcgacctgccctcggagtggtatctaaagacccgtcagagt
gttcagcaattcacaatctgtcagattggattgtctgtgttttccagtattgaaggagag
tcaaacaagtatgtagcccattcgtgtaacttctttctcttccccacgacgtttggggtt
ttggattcggagttctctttccaggcttccagtgtccagtttctgaatcagtatggcttc
gactacaacaagtttctcaaaaacgggatcccatatatgaatgaagaacaggagaagaaa
atcaaacacaacatcctgactgggaactggaaagttcgcagttctctggataaagaccag
atcaaggtggtgattgatgaggtgacacggtggctggacctggcggaggagggcgactgg
atgactctccctggtattgctggcttccaggcctttgagatccagctggtgctgaggcag
gccctccccaacatctggacggtcctgagagaccaggggataatagtgaaaaaagtgagc
aaacagcatcgctggtaccttgagaacacctcctgcgatcgagagagctgttggaaggag
aagattcttctctctgcgaggggtttttctgtgtttttccagatgctggtgaaagcccag
aagcccttggtgggccacaacatgatgacagacctactgcatctgcacgagaagttcttc
cggccgcttccagaaagctatgatcaatttaagctgaatatccacagcctatttcctgtt
ctcattgacaccaagaatgtgacaaaggacatctggaaggaactgaatttcccaagggtt
tcgaatctctcagaagtttatgaagtcctaaacagtgacttgaatcctaccaaaaattcc
gggccagtgattattcacgcaagcaagtgcgaaaaatacgctgagaccaagtacccccac
gaggctgcgtatgatgctttcctctgtggctcggttcttctgaaagtggcacatttgctc
ctgtggagagtacatggagctggctccctgcctgagctgtccttccctctgtacctcgat
gtgctggctccctatgtgaaccaggtgaatcttatccgagccggggtccctaagatcaac
ttttctggtccagattaccccagtatccgacctcccatcctcctcctcagcgtccggagg
tggcctggggtcagcgagcagcaagtgtaccgtgagtttcagaatctctgcaagttcgat
gtccggcgactgtcgcggagccagttcctgctcttgaccaataagttcaaggacgctcgg
agcatcctgagggagtaccggggccaccccaccctgcagatctccctctatcggtactgg
agacactcccccgacatcaactgcttgttgcagatctgtggcgtggtggccacctgggcc
ctcctcgctctcgtcctcgggagacctgacccctga
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