Panthera pardus (leopard): 109247299
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Entry
109247299 CDS
T06062
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
ppad
Panthera pardus (leopard)
Pathway
ppad04151
PI3K-Akt signaling pathway
ppad04510
Focal adhesion
ppad04512
ECM-receptor interaction
ppad04611
Platelet activation
ppad04820
Cytoskeleton in muscle cells
ppad04926
Relaxin signaling pathway
ppad04933
AGE-RAGE signaling pathway in diabetic complications
ppad04974
Protein digestion and absorption
ppad05146
Amoebiasis
ppad05165
Human papillomavirus infection
ppad05205
Proteoglycans in cancer
ppad05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109247299 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109247299 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109247299 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109247299 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
109247299 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
109247299 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
109247299 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
109247299 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109247299 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
109247299 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
109247299 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109247299 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppad00536
]
109247299 (COL1A1)
Glycosaminoglycan binding proteins [BR:
ppad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109247299 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
109247299
NCBI-ProteinID:
XP_019271348
Ensembl:
ENSPPRG00000006898
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEEDIPPVTCVQNGLRYYDRDVWKPEACRICVC
DNGNVLCDDVICDETKNCPGAHVPPGECCPVCPDGEASPTGQETTGVEGPKGDTGPRGPR
GPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGGISVPGPMGP
SGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGE
RGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP
RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGS
EGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP
SGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGP
PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS
PGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP
PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV
PGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGA
PGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE
AGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP
AGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGK
EGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGL
PGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGS
PGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGA
RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP
PGAAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQ
PPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLK
MCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKDKRH
VWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGN
LKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGNWGKTVIEYKTTKTSRLPIIDVA
PLDVGAPDQEFGIDIGPACFL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagaagacatcccaccagtcacctgcgtacagaac
ggcctcaggtactatgaccgagatgtttggaaacccgaggcctgccggatctgtgtctgc
gacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaactaagaactgccccggc
gctcatgtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacc
ggccaagaaaccacaggagtcgagggacccaaaggagacactggcccccgaggcccaagg
ggacctgccggcccccctggccgcgacggcatccctggacagcctggacttcctggaccc
cccggccctcccggaccccccggaccccctggcctcggaggaaactttgctccccaaatg
tcttacggctacgatgagaagtcagctggaggaatctctgtgcctggccccatgggtcct
tctggtcctcgtggtctccctggtccccctggcgcacctggtccccaaggtttccaaggc
ccccctggtgagcccggcgagcctggagcttcaggtcccatgggtccccgtggtccccct
ggtccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgag
cgtgggcctcctggacctcagggcgcccggggattgcctggaactgctggccttcctgga
atgaagggacacagaggtttcagtggtttggatggtgccaagggagacgctggtcctgct
ggtcccaagggcgagcctggtagccctggtgaaaatggagctcctggccagatgggtccc
cgtggtctgcctggtgagagaggacgccccggagcccctggccctgctggtgctcgtgga
aatgacggtgctaccggtgccgccggcccccctggtcccactggccccgctggtcctccc
ggcttccctggtgctgttggtgctaagggtgaagccggtccccaaggagcccgtggctct
gaaggtccccagggtgtgcgtggcgagcccggcccccccggccctgctggtgctgctggc
cctgctggaaaccccggtgctgacggacagcctggtgccaaaggtgccaacggcgctcct
gggattgctggcgctcctggcttccctggtgcccgaggtccctctggaccccagggcccc
agcggccctcccggtcccaagggtaacagtggcgaacctggtgcccccggcaacaaagga
gacactggcgccaagggagagcctggccccactggtatccaaggcccccctggccccgct
ggggaagaaggaaagcgaggagcccgaggcgaacccggccccactggcctgcccggaccc
cctggcgagcgcggcggacccggtagccgtggcttccctggcgcagatggtgtggctggt
cccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaaggttctcct
ggtgaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggaagc
cccggcagccccggtccggatggcaaaactggtccccctggtcccgctggtcaagatggt
cgccccggacccccaggcccccctggtgcccgtggtcaggctggtgtgatgggattccct
gggcctaaaggtgctgctggagagcctggcaaagcaggagaacgaggtgtccctgggccc
cctggcgctgttggtcctgctggaaaagatggagaagctggagctcagggaccccccggc
cctgccggccccgctggtgagagaggcgaacagggccctgctggctctcccggattccag
ggtcttcctggccccgcgggtcctcccggtgaagcaggcaaacctggcgaacagggtgtt
cctggagatcttggtgcccccggcccctctggagccagaggcgagagaggtttccctggt
gaacgcggtgtgcaaggtccccccggtccagccggtccacggggagccaatggtgcccct
ggcaatgatggtgctaagggtgatgctggtgcccccggagcccccggtagccagggcgct
cctggccttcagggaatgcctggtgaacgaggtgcagctggccttcctggccctaagggt
gacagaggcgatgccggtcccaaaggtgctgatggttctcctggcaaagatggcgtccgt
ggcctgactggccccattggtcctcctggccccgctggtgcccccggtgacaagggtgaa
gctggtcccagcggccccgctggtcccactggagctcgtggcgcccctggagaccgtggt
gagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggccaacct
ggtgctaaaggcgagcccggagatgctggtgctaaaggcgatgctggtccccctggtccc
gctggccccactggaccccccggccccatcggcaacgttggtgctcctggacccaaaggt
gctcgaggcagtgccggtccccctggtgctactggtttccctggtgctgctggccgagtc
ggtcctcccggcccctctggaaacgctggaccccctggtcctcccggccctgtcggcaaa
gaaggcggcaaaggcccccgcggtgagactggccccgctgggcgtcccggggaagtcggt
ccccctggtccccccggccctgccggtgagaaaggatctcctggtgctgacggacctgct
ggtgctcccggcactcccggacctcaaggcattgctggacagcgtggcgtggttggcctg
cccggtcagcgaggagaaagaggcttccctggtcttcccggcccctctggtgaacctgga
aaacaaggtccttctggatcaagtggtgaacgtggcccccctggtcccatgggcccccct
ggattggctggaccccctggcgagtctggacgtgagggatctcctggtgctgaaggctcc
cctggacgagatggttctcccggccccaagggtgaccgtggtgagactggccctgctggc
ccccctggtgctcctggcgctcctggtgcccctggtcccgtcggccccgctggcaagaat
ggcgaccgtggtgagactggtcccgctggtcccgccggtcccatcggccccgtcggtgct
cgtggtcctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggt
gacagaggcataaagggtcaccgtggcttctccggtctccagggtccccctggccctccc
ggctctcctggtgaacaaggtccttccggagcttctggtcctgctggtccccgaggtccc
cccggcgctgctggctctcctggcaaagacggactcaacggtctcccaggccccattggc
ccccctggtcctcgtggtcgcactggtgatgctggccctgttggtccccccggccctcct
ggaccccccggtcctcccggtcctcccagcggtggtttcgacttcagcttcctgccccag
ccacctcaagagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtg
gtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgag
aacatccggagccccgaaggcagccgcaagaaccctgcccgcacctgccgtgacctcaag
atgtgccactccgactggaagagcggagaatactggatcgatcccaaccaaggttgcaac
ctggatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccact
cagccccacgtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcac
gtctggtatggcgagagcatgaccgacggattccagttcgagtatggtggccagggctcc
gatcccgccgatgtggccatccagctgactttcctgcgcctgatgtccaccgaggcgtcc
cagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagactggcaac
ctcaagaaggccctgctcctccagggctccaacgagatcgagatccgggccgagggcaac
agccgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggaaactggggc
aagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcc
ccattggacgttggcgccccagaccaggaattcggcatcgacattggccctgcctgcttc
ctgtaa
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