Panthera pardus (leopard): 109247441
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Entry
109247441 CDS
T06062
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ppad
Panthera pardus (leopard)
Pathway
ppad03013
Nucleocytoplasmic transport
ppad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109247441 (CASC3)
03015 mRNA surveillance pathway
109247441 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppad03019
]
109247441 (CASC3)
Messenger RNA biogenesis [BR:
ppad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109247441 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109247441
NCBI-ProteinID:
XP_019271604
Ensembl:
ENSPPRG00000023670
UniProt:
A0A9V1E0H5
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANCSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHEASYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDAAPPAPDRPIEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPPVPETTPSPPAKTGAWEAPVDSTTSGLEQDVAQLNITEQNWTPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggcgca
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagcggctctctgccttctcagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggcgaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatggagggcgatgctgttctctcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattgttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtaactggagagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaggatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggagacagcgaaagctatggaaggatgagggtcgctgggagcat
gataagttccgggaagatgaacaggctccaaagtctcgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttattaacagaaat
gctgcaggcactggccggatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggatgctggtgggcagcatggtggccgatctggt
gagactgttaaacatgaagccagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagctgatgctcaagtgcttggcagtcctgagaaggaagaggcagcc
tcagagattccagctgctgctcctgatgctgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaacgagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcgcctccagtcccagaaact
accccttctccacctgctaagactggagcctgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggactccagggcag
ccttcgttcctacagccacgtgagcttcggggtatgcccaatcacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcagagacctgtgccggagcctcctgcccctcctgtgcacatc
agtatcatggaaggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctccccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcctagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctatatcctaatacgcaggccccatcacaggta
tatggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccattaagcccccacctcctgaggttgtaagcagg
ggttccagttaa
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