Panthera pardus (leopard): 109249029
Help
Entry
109249029 CDS
T06062
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
ppad
Panthera pardus (leopard)
Pathway
ppad04151
PI3K-Akt signaling pathway
ppad04510
Focal adhesion
ppad04512
ECM-receptor interaction
ppad04974
Protein digestion and absorption
ppad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109249029 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109249029 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109249029 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109249029 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109249029 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppad00536
]
109249029 (COL2A1)
Glycosaminoglycan binding proteins [BR:
ppad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109249029 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
109249029
NCBI-ProteinID:
XP_019274710
Ensembl:
ENSPPRG00000002708
UniProt:
A0A9V1E5Q1
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggcgacaaa
ggtgaaaaaggtgcccctggaccgcgtggcagagacggagagcctgggacccctggaaat
cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaactttgct
gcccagatggccggaggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa
gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt
ccccgcggtcctcctggcccccctggaaagcctggcgatgatggtgaagccggaaagcct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggcgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttccccg
ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccccgctggggct
gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcccggtgccaagggtgaagctggccccact
ggtgctcgaggccccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga
gcccctggtcctgctggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct
gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggtgccaatggcgatcctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggacgccccggtgatgccggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggt
gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag
ggacttcctggtgcccctggactgagaggtcttcccggcaaagatggtgagaccggtgct
gcggggccccccggacccgctggacctgccggtgaacgaggcgagcagggtgcccctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca
ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat
ggtgagaagggagaagttggacctcctggtcctgcaggaactgctggtgctcgtggcgcc
ccgggtgaacgtggagagaccggcccccccgggcctgctggattcgcaggacctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctggacctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggtcccccgggagccaccggattccctgga
gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagcggcccccctggtcgt
gctggcgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg
ggcattgttggtcttcctgggcaacgtggtgagagaggattccccggcctgcctggccca
tcgggtgagcctggcaagcagggagctcccggagcatctggcgaccgaggtccccccggc
cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcctggagcccctgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca
ggaccagcaggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcagggt
ctgcccggccctcctggcccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc
cctggccccattggacctcctggtccccgcggacgttcgggcgaaactggcccggctggt
cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaatatggagactggc
gagacctgcgtctaccccaacccggcgagtgttcccaagaagaactggtggagcagcaag
agcaaggacaagaagcacatctggttcggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg
gatgaagcggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag
atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgtctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
