KEGG   Panthera pardus (leopard): 109253209
Entry
109253209         CDS       T06062                                 
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
  KO
K06100  symplekin
Organism
ppad  Panthera pardus (leopard)
Pathway
ppad03015  mRNA surveillance pathway
ppad04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ppad00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109253209 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109253209 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppad03021]
    109253209 (SYMPK)
   03019 Messenger RNA biogenesis [BR:ppad03019]
    109253209 (SYMPK)
Transcription machinery [BR:ppad03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109253209 (SYMPK)
Messenger RNA biogenesis [BR:ppad03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109253209 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     109253209 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1
Other DBs
NCBI-GeneID: 109253209
NCBI-ProteinID: XP_019281489
Ensembl: ENSPPRG00000004282
UniProt: A0A9V1EH39
LinkDB
Position
Unknown
AA seq 1273 aa
MAGSSGDSITRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSSSSSTRPGPPQPEETIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKEATGGLTSKEERSPQTLTPAGDDTVKTPSPA
AEESGEPETKGNS
NT seq 3822 nt   +upstreamnt  +downstreamnt
atggcaggcagcagcggagatagtatcactcgtcggagtgtggcatcccagtttttcaca
caagaggaggggccgggcatcgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcggcgctgatcaccaatgactcgaagatcacagtactcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcggacaagtcaattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aaacgagacattgagttactcctgaaactgatcgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtccgccatggctggtgacatcattctgctgctggattctgacaatgacggcatccgc
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggcagac
tcggaggtgccccgccgccaggagcatgatatcagcctggaccgcatcccccgggaccac
ccctacatccagtacaatgtgctgtgggaagagggcaaggcagctttggagcagttgctc
aagttcatggtgcatcccgccatctcctccatcaacctgaccacagctctgggctccctt
gccaacattgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc
ctgcatgccaacctgccccctacgctggccaaatcccaggtgagcagcgtgcgcaagaac
ctcaagttgcacctgttgagtgtcctgaagcacccggcctccttggagtttcaggcccag
attaccaccctgctggtggacctaggcacacctcaggctgagattgcccgcaatatgccc
agcggcaaggatgcccgcaagcggccccgggacgactcggattccacgctcaagaagatg
aagttagagcccaacctgggggaagatgatgaggacaaggacttggagccgggcccatca
ggaacctccaaggcctcagcccagatctcaggccagtcggatacagacatcaccgccgag
ttcctgcagcctttgctgacacctgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagccatctatacccccgtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg
ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggaaaag
gtggtgaagccagagagtgtcctgattaagcgacgcctgtcggcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctgctctggaggaggaggcgccccaggccaag
aggaggccagagcccatcatccctgtcacacagccccggctggcgggcgctggtgggcgc
aagaaaatcttccgtctgagcgatgtgctcaagcccctgaccgacgcccaggttgaggct
atgaagctgggcgccgtgaagcggatcctccgggcagagaaggccgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctggccagtctggtgacacagtttgactcgggcctg
aaggccgaggtcttgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcttggctctaccaggagtacaatgcctacctggcagctggtgcctcgggcaccctggac
aagtacgaggactgccttatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcacgaaggttgtgctagaggcaccgctgatcactgagagcgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacttacctgggcatgtctactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatgtac
gaaaaggagcagctgcgagagtatgtggagaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccatctgtgctgtttggagccgacaaggacacagaggtggcagcg
ccctggaccgaggagacagtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctgatccacgaactggccgccgtgtacactgaggccatcgctgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccgccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccgctg
aaccctggagagctgcttattgcgttgcacaacattgactcggtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcctgggggggttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagttgccgccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcccgcggggcccctggaagaggacgac
ctggagcccctggccctggccccagccccagccccccggccccctcaggacctcatcggc
cttcggctggcccaggagaaagccttaaagcggcagctggaggaggaacagaagctgaag
ccgggaggagtgggagccccctcgtcctcctcctcgtcctcctcttcctccacccggcca
ggccctccccagcccgaggaaaccatagatttccgggaggaggggcctgagtgtgagacc
cccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgcactcctggac
tctagtcttgaagggcccctaccgaaggaggcaacaggcgggttgacctcaaaggaggag
cgcagcccccagaccctcacccctgccggagacgataccgtgaagacccccagccccgcc
gccgaggaatccggggaacccgagaccaaggggaacagctga

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