Panthera pardus (leopard): 109255459
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Entry
109255459 CDS
T06062
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
ppad
Panthera pardus (leopard)
Pathway
ppad03015
mRNA surveillance pathway
ppad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109255459 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
109255459 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppad03019
]
109255459 (PABPC4)
03041 Spliceosome [BR:
ppad03041
]
109255459 (PABPC4)
Messenger RNA biogenesis [BR:
ppad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109255459 (PABPC4)
mRNA cycle factors
Stress granule specific factors
109255459 (PABPC4)
Spliceosome [BR:
ppad03041
]
Complex C
Other components
Complex C specific factors
109255459 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
109255459
NCBI-ProteinID:
XP_019285718
Ensembl:
ENSPPRG00000024727
UniProt:
A0A9V1EPI1
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gccgagcttggagccaaagccaaggagttcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagcctgaaagagctgtttagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgcgcacagaagaaagtggaacggcaggccgagttaaagcggaaattt
gaacagctgaagcaagagagaattagtcggtatcagggagtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaagaaaagagttttctccttttggatcaatc
accagcgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcggtcactgagatgaatggacgcatcgtgggctcc
aagccgctgtacgtcgccctggcccagagaaaggaagagagaaaggctcacctgaccaac
cagtatatgcagcgggtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctactttgtgccagcagttccacaggctcagggaagacct
ccgtattacacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
accttagcacctcgtgctgctgttgctgctgctgctcctcgggctgtcgcaccttataaa
tacgcttccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagcccttgaccgcctccatgttggctgcagcacccccc
caggaacagaagcagatgttgggagaacgtttattcccactcatccaaaccatgcattca
aacctggctggaaaaatcacaggaatgctgctggagattgacaactctgagctgctgcac
atgctggagtcccctgagtctctccgctccaaggtggatgaagctgtggcggttctgcag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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