Panthera pardus (leopard): 109262438
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Entry
109262438 CDS
T06062
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ppad
Panthera pardus (leopard)
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppad03019
]
109262438 (DDX60)
Enzymes [BR:
ppad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109262438 (DDX60)
Messenger RNA biogenesis [BR:
ppad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109262438 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109262438
NCBI-ProteinID:
XP_019296585
Ensembl:
ENSPPRG00000009286
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MGLEEHMMFLEKMSQLIMSALPKAKHSSLFNDFVESEFFLIDGDSLLATCICEKSLKQGQ
QLHFFYVIECYLMDLISKGGQFAIVFFKDAEYAYFSFPELLPLRTAFILHLQHNTTIDVQ
TEFSGCLSQGWKSFIEDSYPYYLMVADEGLNHLQTHLFNFLIIQSWAIKVNVVLSSGQTS
NILRLYAYLMPSMYTNQTFFKENKKKIENAYKILIKQLQECRILALESLFGNLKWKNMMD
EACETISLLKQLWPEGSDIRRVLCVTSCSLSLRMYHHFLENRNKTIFDQNTDIQEVESNC
LNMMQEMEDLCKLHCLSVVFLLHLPLSRRACARFITSHWAQNIQTFLKMKKWCEYFILSN
INIFEFWNLNLIHLCDLSDELLLKNIAFYYENENVEGLHLNLGDVIMKDYEHLWNTVSKL
VRKFSVGKPFPLRTTKLSFLEKSPSPIKDTSKENIPNLGFIPMSCELVDKFVGDILKDLP
FLKSDDPVVTSLVKQKEFDELVHWHSHRPLSDDYDRTKCQFDEKSRDPRFLRSVQKYHVF
QRFYGSSLESVSPKVVVTQAVKPKSNFSVPKNKKAHETKAEIITRENKKRLLAKEEQKEE
KKWNAVSFSIEEEMKENLISGIKNLEDFLKSCKSNSVKFRVEVVALTACLKAWKEQCRGK
GESTKDLSIAVQMMKRIHSLMERYPELLQEADQQLIARCLKYLGFDDLTSSLYPTQVVGD
DIKEKKMDKYSVGMGPVRFQLQYMGHYLIRDERKDPDPRVQDFIPDTWQRELLDVVDNNE
SAVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQVAATVQSRFTKNLPNG
EALCGVFTRDYRHDALNCQVLITVPACFEILLLSPHRQAWVKRIRYVIFDEVHCLGGEIG
AEVWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKRYWKQEDNTMGKNRNAGYCASSHK
YQFRMKESYKVRLVLYGERYNDLEKHICSITHDDIYFDHFHPCAALTTDHIEKYGFPSDL
TLSPRETIQLYDTMFQFWESWPRAQELDPEKSIHCKNKIVIKKLDARKYEESLKAELTSW
IKNGHAEEAKMVLRNLSPDSVFSSGNTVKMFPLLVEKLRKMEKLPALFFLFNLGDVEERA
LSVRTSLEQKQAEKRSLKADKEAHDVTNKLRKVKKSIEKQKTIDEKSQKNPRKMDQRLIH
EAEHTNLLRTLEKNLEIPQECTYANQKAIDTETLQMVFDRVKFTRKGEELKALARRGIGY
HHSSLNFKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYRQMS
GRAGRRGQDLMGDVYFFDIPLPKIGKLIKSNVPELRGQFPLSITLVLRLMLLASKGDDPE
DAKAKVLSVLKHSLLSFKQPRVTEMLKLYFLFSLQFLMKQGYLDQEGKLMGFAGLVSHLH
YHEPSNLVFVSFLVKGLFRNLCQPTRKGSKHFSQDVMEKLVLVLANLFGRRLLPAKFQDT
TLKFYQSKVFLEDLPEDFNDALHEYNMNVTKDFASFLLSVSKLADMKQEYQLPLSKINFT
GKECEDSQLVSHLMNCKEGRVAISPFACLSGNSDGDLFQPNTPNHVILRTIGINHTQAPV
LWSKIFDNQGRRMPLNAYALDFYKHGSLTGLVQDNRMNEGTAYELLKDFALTIRSISVSL
RELCENEDDNVVLAFEQLSETFFEKLNQV
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaagaacacatgatgtttttagaaaaaatgtcacagttaattatgagtgca
ttgccaaaagccaaacattccagtttattcaatgattttgttgaatctgaattttttctg
attgatggcgattcattacttgctacatgcatatgtgagaaatcattaaagcaggggcag
cagctccacttcttttatgtaattgaatgctatcttatggatcttatcagtaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcagcttccctgaactt
cttcctttgagaactgctttcattcttcatcttcagcataataccaccattgatgttcaa
acagaattttctggatgcttatcacaaggatggaaaagtttcatagaagacagttaccca
tattacctgatggttgcagatgaaggcctgaaccatctgcaaacgcaccttttcaacttt
ttaattattcagtcttgggcaatcaaggtcaatgttgtgctttcctcagggcaaacatcc
aatattcttcgactttatgcgtaccttatgccaagcatgtacacgaaccaaacttttttc
aaggagaataaaaagaagattgagaatgcttataaaatcctgattaaacaattgcaagaa
tgtagaattttagcactagaatctctttttggaaatttaaaatggaaaaatatgatggac
gaggcatgtgaaactatttctctgcttaagcaactctggccagaaggatctgacattcgg
cgtgttctttgcgttacttcatgctcgttgtctttgagaatgtaccatcactttttagaa
aacaggaacaagactatctttgatcagaacactgacatccaagaggtggaaagtaattgc
ttaaacatgatgcaagaaatggaagatttgtgtaaactgcattgtctcagtgtggttttt
ctactccacttacctctttctcgaagggcctgtgctagattcatcacttcccattgggct
cagaacattcagactttcttgaaaatgaaaaagtggtgtgaatatttcatcctaagtaat
ataaacatttttgaattttggaatctgaatttaattcacctttgcgacttaagtgatgag
cttttgttgaagaatattgctttttactatgaaaatgaaaatgttgaaggcctacatttg
aatttgggagatgtcattatgaaggattatgaacatctctggaatactgtgtcaaagttg
gtcagaaagttttctgttggaaagccatttcctctgagaacaacaaaactttcttttctt
gaaaagagtccatcaccaatcaaagatacttccaaggaaaatattcctaacttgggtttt
attccaatgtcatgtgaattggttgataagtttgttggtgacattttgaaagatttgcct
ttcttaaagagcgatgatcctgttgtaacttcactggttaaacaaaaggaatttgatgaa
cttgtgcattggcattctcacagaccgcttagtgatgattatgacaggacaaagtgtcaa
tttgatgaaaaatctagagatcctcgttttcttaggtctgtgcagaagtatcatgttttt
caacgattttatgggagctcattagaatcagtctctccaaaagttgttgtaactcaagct
gtcaagccaaagagtaatttcagtgtacccaagaacaaaaaggcacatgagaccaaggct
gaaataattactagagagaataagaagaggttacttgctaaggaagaacaaaaagaggag
aaaaaatggaatgctgtgtcattttctattgaagaggaaatgaaagagaacttaatctct
ggaataaagaacctggaagattttttaaaatcatgtaaaagtaactctgtgaaatttcga
gttgaagtggtcgcgttaactgcctgcttgaaagcgtggaaagaacagtgtcgcggtaaa
ggtgaaagcacaaaagatttaagtatagctgttcaaatgatgaaaaggatccactccttg
atggaaagatacccagaacttttgcaggaggcagatcagcaactcatagccagatgtctg
aagtacttaggatttgatgatttgacaagttctttatatccaacccaggttgtaggagat
gacataaaggagaagaaaatggataaatattcagttggcatgggaccagttcggtttcaa
ctacaatacatgggccattatttgatacgagatgagagaaaagatccagatcccagagtt
caggattttattcctgacacgtggcagcgtgaactcctcgatgttgtggataataatgag
tcagcagtgattgttgccccaacgtcctcgggcaaaacctatgcttcctactactgcatg
gagaaagtgctgaaggagagcaatgaaggggtggtcgtgtatgttgcaccaacaaaggcc
cttgttaatcaagtggcagcaactgttcagagtcgttttaccaaaaatctgccaaatggt
gaagctctatgtggtgtttttacaagggattatcgtcatgatgccctaaactgtcaggta
cttattacagtgcctgcctgctttgaaattctgctgttatctcctcatcgccaagcatgg
gtgaaaaggatcagatatgttatatttgatgaggtccattgtcttggtggagaaattgga
gcagaagtctgggagcatctccttgtcatgatccgatgtccctttttggctctttcagct
accataagtaaccctgaacatcttactgagtggctacaatcagtaaaacgctactggaaa
caagaagacaatacaatgggaaaaaatagaaatgctggctattgtgccagttctcacaaa
tatcagtttcgaatgaaggaatcatataaagttagacttgtgctctatggagagagatac
aatgatttagagaagcatatatgttcaataacacatgatgacatctattttgatcatttt
cacccatgtgctgcactaacaacagatcatattgaaaagtatggatttccttctgacctt
accctttcccctcgagaaaccatccagctttatgataccatgtttcaattctgggaaagc
tggcccagggcccaagagttggatccagagaaatccattcattgtaagaataaaatagtc
attaaaaagttggatgctagaaaatatgaagagagcttaaaggcagaattaacaagttgg
attaaaaatggccatgctgaggaggccaaaatggttctgaggaatcttagtcctgattca
gtatttagttcaggaaacacagtaaaaatgtttccactgctcgttgagaagctaaggaaa
atggaaaagttaccggcattattttttttatttaacttaggagatgtagaagagagggct
ttaagcgtgagaacttccctggagcaaaagcaagcggaaaaaaggtctctcaaagctgat
aaagaagcccatgatgtgaccaacaaacttcgaaaagttaaaaaatccatcgagaaacaa
aagacaatagatgagaaaagccagaaaaatcccagaaaaatggatcaaagactaatacat
gaagctgaacatactaatctactcaggactttagagaagaacctggaaatccctcaggag
tgtacctatgctaaccaaaaagcaatagacacagagactttgcagatggtgtttgatcga
gtaaaattcacaagaaaaggtgaagaactgaaggctttggcaagaaggggtattggatat
catcacagctctttaaacttcaaagaaaaacagttggttgagattctttttcggaaagga
tttattagggtggtgacagctactgggacacttgctttaggcatcaacatgccttgtaaa
tctgtggtttttgctcaaaactcagtctacctggatgctttaaattacagacagatgtct
ggacgtgctggaagacgaggtcaagacctgatgggagatgtatatttctttgatattcca
ttgcccaaaataggaaaactcattaaatccaatgttcctgaactgagaggacagtttcct
ctcagcataaccctggtcctgcgactcatgctgctggcttccaagggagatgacccagaa
gatgctaaggcaaaggtgctgtcagtgctaaagcattcattgttgtccttcaaacaaccc
agagtcacggagatgttaaaactttacttcttgttttctttgcagtttcttatgaaacag
ggctatttagatcaagaaggtaaactgatggggtttgctggacttgtatcacatttgcat
tatcatgagccttctaatcttgtgtttgtcagttttcttgtaaaaggccttttccgtaat
ctttgtcagccaactaggaaaggctcaaaacatttttctcaagatgttatggaaaagcta
gtgttagtattggcaaatctatttggaagaagactgcttccagcgaagttccaagatacc
actctcaagttttatcaatcaaaggtgttccttgaggatcttcctgaggattttaatgat
gctttacatgagtataacatgaacgttacaaaagacttcgcctccttcctactaagtgtt
tctaaattggctgatatgaaacaggaatatcaactcccattgtcaaaaataaatttcaca
ggaaaagaatgtgaggattcccaacttgtgtctcacttgatgaactgcaaggaaggaaga
gtagctatttctccatttgcttgcctctctggaaactctgatggtgatttgtttcagcca
aatactccaaaccatgtcattctgcgcacaattggtatcaatcacactcaggctcctgtg
ctgtggtcaaagatatttgataaccaaggaagaagaatgccacttaatgcttatgcactt
gatttctataaacatggttccttgacaggactagtccaggacaacaggatgaatgaagga
actgcttatgagttgttgaaagattttgcactcaccattcgatctatcagtgtttccttg
cgtgaactatgtgaaaatgaagatgacaatgtggtcttagcatttgaacaattgagtgaa
acctttttcgaaaaacttaaccaagtttaa
DBGET
integrated database retrieval system
