Panthera pardus (leopard): 109263058 Help Entry 109263058         CDS       T06062                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism ppad  Panthera pardus (leopard) Pathway ppad05014   Amyotrophic lateral sclerosis ppad05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ppad00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     109263058 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     109263058 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ppad03400]     109263058 (SPG11) DNA repair and recombination proteins [BR:ppad03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      109263058 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  109263058 NCBI-ProteinID:  XP_019297815 Ensembl:  ENSPPRG00000004121 LinkDB All DBs Position Unknown AA seq 2424 aa AA seqDB search MERVLPMLLVPVPAEATRRLGSRAQLHREQEVLGSLTAAGSLQVLSLAPSGRSGGACCLN GPFRHFVWDASHKSSSPTDKPKLLALSENYELFIYEFNLKDGRCDATILYSCSEETLQKL LEDQNISISILSLRILSFHDNTSLLLINKCIIVHLIFPERDAEVGVCSCFTLPLPAQAAD RIIDTQLCRGILFVLSSLGWIYIFDTVDGRHVAHVDLALHQEDMCDEQQQEPAKVSSFTS LKVSQDLDVVVIISSSNSAIALNLNLYFRQHPGHLLCERTQEDMPVEGPKGIDEDDPVNS DYNMKLTKFSFQVDRSWKAQLSSLNETIKSSNLEVSYCAPWFQNILHLESPESGNPSTSM PGWAFLPPDIMHNQYNFPQKDHAKTRDPGRSWKIMHIHEQEEPIELKCMSVTGFSALFTW AVERTGCTIVLWDLETQGLQCFSLGQKCIPIDSCGDQQLCLVLTENGLSLILFGLTQEEF LNRLMIHGSASTVDSLCHLNGWERCSIPIHALEAGIENRQLDTVDFFLKSKENLLNPSSK SSVPDQLDHFPSHLYLKNVEKLTPALDLLCSAIRESDSETQSKHFSEQLLNLTLSFLNKQ IKELFLHNEELDEHLQQGVNILTSYINELRTFMIKFPWKIIDTVDEYDVNENVPKVRESD IWKKLSVEEVIADAILSNRIPEAQAFFRINSHSAQRLEELIRIGLNLVFDNLKKNNIKEA SELLKNMGFDVKDQLLKICFYTTDKDIRDFLVEILKEKNYFSENEKRTIDFVHQVEKFYS GHFQENVQIQSFARYRMKEQDFFKHKSVLDSLLKHDPKDKFNKQDHRVVLNWAQWWNQLT QESILLPRISPEEYKSYSPEALWRYLTARHDWSSIILWIGEFQTQNSCASLQQNRWPLLT VDVIDQNTCCNNYMRNEILDKLARSGIFLQSELEDFELFLLRLNRIGGVMQDTLPVQNYR SKEGWDFHSHFILYCLEHSLQYLLYVYLDRYKLNPSNCPFLEKSELYEAHPWFEFLVQCR QVSGNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATTMYAPGGVSQVVQN DENETCLKKVDPQLLKMALTPYPKLKTALFPQYTASNVLPPDITLYHLMQSLLPFDPSRL FGWQSANTLAIGDAGSHLPHFSSPDLVNKYAIVERLNFAYYLQHGRPSFAFGTFLVQELT KSKTPKQLVQQVGNEAYVLGLSSFYIPSIAAACVCFLELLGLDSLKLRVDMKVANIILSY KCRNEDAQYSCVRESLAEKLSKLAMGEKATIEELLILLEEGIWSSIQQQEINRISSESSS QWALAVQFCRIHNVKLSTSYLRECAKANDWLQFIIHSQLHNYPPEEVKSLLQYFSPVLED HLRLAFENLPLVSNSRMDSDQVCNRSPQEFQGNKEEMTDLFEVLLQCSEEPNSGSWLLAE AVKQQAPILSVLASCLQGASTIPCLCVWIITSVEESVAAEATGHIQGSVEGHMWELQDLS VIWKTLLTRRKSKTLIRGFHLFLKDSPLLLMMEMYELCMFFKNYKEAEVKLLEFEKSFET VETTATRVHATIPAAWLKEQVCFLLKLMLQQCGTQYELGKLLQLFVGIEHLFCDGPDVKK LSVLSKILKDTSIAINPVVISSYSPENFQHECRSILEKLETEGQFALARRVAELAELPVD NLVIEEITQEMQTLKHTDQWSLKQARIGFWKKCHENFKRNSISSKAASSFFSAQAPEACE CPAEGALSSIEEAHLLLTLAAHWLAQEGLVPVDELEELEKRIWLCRIAQHTLRENPEETE PRFSQQISTSGELSFESVASEFSISMLAALNTSKYLELNGLPSKETCDNTLGRKEQESLN FLIGRLLDVGCVHEASRICRYFHFYNQDVALVLHCRALASGEASVGDLHPEVHAVLQSAE LPDEEEPGMPLRKARSTSSLDSQSLVMLPPRDEVVTNLETLTSKCLHGKNYCRQVLCLYE LAKELGCSYADVAAQDGEAMLRTILASQRPDRCRQAQAFISTQGLEPDTVAELVAEEVTR ELLTPSEGTGLKQMFTPAEESQTFLQLTTLCQDRTLVGMKLLDKISSVPHGELSCTTELL ILAHHCFTLTCHMEGISRVLQAARLLTDKHLAPSEEYGLMVRLLTGIGRYNEMTYIFDLL HKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAA CIQLKLIESQPWEDRLKDGHHLKQLLLKALTLMLDAAESYAKDSCVRQALHCHRLTKLIT LQIHFLNTGQNTMLINLGRHRLMDCIIALPRFYQASIVAEAYDFVPDWAEILYQQVIVKG DFNYLEEFKQQRLLRSSVFEEISKKYKQHQPTDTAVKNLKKLFTYCEDVYLYYKLAYEHK FYDIVNMLLKDPQTGCCLKDMLAG NT seq 7275 nt NT seq  +upstreamnt  +downstreamnt atggagcgggttctacctatgttgttggtgccagtcccagcggaggcaacacggcggctg ggatcccgggcacagttgcacagagagcaggaggttctggggagcctaacagctgcaggc agcctgcaagtgctttccttggcgccgagcggccggagtgggggtgcctgctgcctcaat ggtccttttcggcactttgtatgggacgcgtctcataagagcagctcaccaacagacaag cccaaactgcttgctcttagtgagaattatgaactgtttatctatgaatttaatttgaaa gatggaagatgtgatgcaaccattttgtatagctgtagtgaggagacattgcaaaagctc cttgaagatcaaaatatcagtatttccatattgtctttgagaattctgtcatttcacgat aacacttcactattgctcatcaacaaatgtatcatcgtacaccttatatttcctgaaaga gatgctgaggttggagtatgcagctgttttacattacccttgcctgcacaggcagcggac aggattattgacacgcagctctgcagaggaattctctttgttttgagtagtttaggctgg atctacatttttgacactgtggatggtagacatgtagctcatgtggatttagcacttcac caagaagatatgtgtgatgagcagcaacaggagccagccaaggtttcttcatttacttcg ctgaaagtgtctcaggacctagatgttgtggtgattatcagctcctccaactctgcaatt gctcttaacttaaatttgtatttcaggcaacacccaggacacctactatgtgaaagaact caagaagacatgcctgttgaaggccctaaggggatagatgaagatgatcctgttaattct gactacaacatgaaactgaccaagttttcctttcaagttgataggtcttggaaagctcag ctatcatcattgaatgaaacaataaagagttccaacctggaggtttcctattgtgctccg tggttccagaatattttgcatttggagtctcctgaatctggtaaccccagtaccagtatg ccaggctgggccttccttccaccagacataatgcacaaccagtataattttccacagaaa gatcatgccaagaccagggatccaggaagatcatggaaaataatgcacattcatgaacaa gaggaacctattgagcttaaatgtatgtctgtgacaggattcagtgcactgtttacttgg gcagtggaaaggacgggctgcaccattgtcctttgggatttggagacccagggcctgcag tgcttttcccttggccaaaagtgtattcctatagacagttgtggagaccaacaactctgc cttgttttgacagaaaatggactctctctgattttgtttggattgactcaggaggagttt ttaaatagactaatgatccatggaagcgccagtactgtggactctctttgccatctcaat ggttgggagagatgctcaatccccatccatgcactggaggctgggatagaaaatcgtcag ctggacacagtagatttctttttgaagagcaaagaaaatcttttgaatccatcctcaaaa tcttctgtacctgatcagttggatcattttccatctcatttatatttaaaaaatgtggaa aagctgacaccagccttggatttactttgctcagcaattagagaaagtgattctgaaacc caaagcaaacacttttcagaacagttgcttaatcttacactgtcttttcttaacaaacaa ataaaggagctttttcttcacaatgaagaactagatgaacatctacagcagggagtgaac attttgaccagctacattaatgaacttcgaaccttcatgataaagtttccttggaagata atagataccgtagatgaatatgatgtaaatgaaaatgtccccaaagtaagagaaagcgat atatggaagaaactcagtgttgaggaagttattgccgatgctattttgagcaacagaata ccagaggcacaggctttcttcaggattaacagtcattctgctcaaagacttgaggagctg attagaataggcctaaatttggtctttgacaatttgaaaaagaacaacataaaggaagcc tctgaacttttgaagaacatgggctttgatgtaaaagaccagttgctcaagatctgcttc tatacaactgataaagatatacgggactttttggttgaaattttaaaagaaaaaaattat ttttctgaaaatgaaaagagaactatagacttcgtgcatcaagttgagaagttttattca ggacattttcaagaaaatgtgcagatccagtcctttgccaggtataggatgaaggaacag gattttttcaagcacaaatctgttttggactcactcctgaaacatgatcctaaagataaa tttaacaaacaggaccacagagttgtgttaaattgggctcagtggtggaatcaactaaca caagaatccatccttctccccaggataagtccagaagagtacaaatcatattctcccgaa gccctctggagatacctcacagctcgccatgattggtcaagcattatcttgtggattgga gaatttcagacccagaacagttgtgcttcacttcagcagaacagatggccccttctgact gttgatgttattgatcagaatacttgctgcaacaactacatgaggaatgaaattttagat aagctggccaggagtgggatttttcttcagtctgaactagaagactttgaactcttcctc ctaagactgaaccgaattggaggtgtgatgcaagatactctccccgttcaaaactacagg tccaaagaaggttgggatttccattctcacttcattctctattgtttggaacacagtctg cagtatcttctctatgtctatcttgaccgttacaaacttaatccttcaaattgtcccttt ttggaaaaaagtgaattatatgaagctcacccttggtttgaatttttagttcagtgtcga caagtttccggtaatttaacagatcccaaattgatcttccaggctagccttgcaaatgct cagatactgattcccagcaaccaggccagtgtaagcagtatgctgttggaaggacatact ctcctggcccttgctactacaatgtatgcccctgggggtgtcagccaggttgttcagaat gatgaaaatgagacctgtttgaagaaagtagatccccagttactgaagatggcattaact ccttatcccaagctaaaaactgctctattcccacagtatactgcctctaacgtcctgcca cctgatattacactttaccaccttatgcagtcattattgccctttgatcctagcagattg tttggctggcaatctgccaacacactggctataggagatgcagggagtcatctcccgcat ttttctagccctgacctggttaataagtatgctatagtggaacgtctgaattttgcttat tatttacaacatggacggccttcatttgcatttggtacttttctggtccaggaattaacc aagagcaagactcctaagcagctggtccagcaagtaggcaatgaagcctatgttttagga ctctcctccttctacataccttcaatagcagctgcgtgtgtttgtttcttagaactgctt ggcctcgacagcctaaagctcagagttgatatgaaagtggccaatataattttgagctac aagtgtagaaatgaagatgctcagtacagctgtgtcagagagtctctagctgaaaaacta tctaaactggctatgggtgaaaaggcaaccatagaagaattgcttattcttttagaagaa ggtatatggagcagcattcagcagcaggaaataaataggatatctagtgaatctagcagc cagtgggcattagcggtacagttctgcaggatccacaatgtgaaactgagcacgtcttat ctcagagaatgtgccaaagcaaatgattggttacagttcattattcacagtcaactccat aactatcccccagaggaggtgaaatctcttcttcagtatttcagtcctgtccttgaagac cacttaagattggcttttgagaacttgcccttagtgtccaactccaggatggacagtgat caagtctgcaacaggtccccccaggaattccagggaaacaaagaagagatgactgatctc tttgaagttctgctccagtgctcggaggagccaaactccgggtcctggctcctagctgaa gcggtgaaacaacaggcccctatccttagtgtcttggcctcatgtctccagggtgccagt actattccttgtctctgtgtttggatcatcacatctgtggaggagagtgttgcagccgaa gcaacaggacacattcagggctcagtggagggccacatgtgggagcttcaagacctctca gtcatctggaaaacattgttaacaaggcggaagagcaaaactctcatcagaggtttccac cttttcttgaaggattccccactactgttgatgatggagatgtatgaactatgtatgttc tttaagaattataaggaagctgaagttaaacttctggagttcgaaaaaagctttgagact gttgaaacaacagccacaagggtccatgctaccatccctgctgcgtggctgaaggagcag gtgtgttttcttttgaagcttatgctgcagcagtgtgggacccagtatgaactggggaag cttttgcagctatttgttggaatagaacatctcttctgtgatggtccagatgtgaagaag ctctctgtccttagcaaaattttgaaggatacatccatagccattaatcctgtagttatt agcagctacagccctgagaattttcagcatgaatgcagatctattttggaaaaactggag acagagggacagtttgctttggccaggagggtagcagaattagctgagctacctgtggac aacttggttattgaagagataacacaggaaatgcagaccttaaaacacactgaccagtgg tccctgaaacaagcaagaattggcttctggaaaaaatgtcacgagaattttaagagaaat tccatttcaagcaaagcagcttcctcctttttctcagcccaggcccctgaggcatgtgag tgcccagctgagggggcactgagcagcattgaggaggcccatctgctgctgacactggct gcacactggcttgctcaggagggcctggtgcccgtggacgagctggaggagctggagaag cggatctggctctgccgcatcgcccagcacaccctcagggaaaacccagaggaaacagag cccaggttttctcaacagatctcaactagtggggaactttcctttgaaagtgtagcgagt gagttttcaatctccatgttggccgctctgaacacatcaaaatacttagaacttaatggc cttccatccaaagagacttgtgataacacactgggtcggaaggagcaggaatcgctgaac ttcctgatcgggcgcctattggacgttggctgtgtgcatgaagcaagtagaatatgtcgg tattttcatttctataaccaagatgttgccttggtgttgcactgcagagcactggcttca ggggaagctagtgtgggtgacctgcacccagaagtccatgctgtcctgcaaagtgctgag ctgcctgacgaggaggaacctggcatgccactcaggaaagcccggagcacttcaagtttg gatagtcagtcacttgtgatgctgccccccagggatgaagtggtgactaatctggaaact ctgacaagcaaatgcctccatgggaagaactactgtcggcaggtcctgtgtctgtatgaa cttgccaaggagttgggctgttcctatgcagatgtggccgctcaggacggtgaggccatg ctcaggacgattttggcctctcagcggcccgaccgatgcaggcaggcccaggctttcatc agcacccagggcctcgagccagacacagtggctgaacttgtggccgaagaggtgacccgg gagctgctgaccccatcggagggaacaggacttaagcagatgttcaccccagcagaggaa agccagacgtttcttcagctgaccactctgtgtcaagaccgcacgttggtaggcatgaag ctattagacaagatttcctccgttccccatggggagttgtcttgcaccacggagctgctg atcctggcccatcactgcttcacgctgacatgccacatggagggcatcagccgagtcctg caggctgcccggctgcttacagacaaacacttggcccccagtgaggagtatgggctgatg gtgcgcctgctcactggcattggaaggtacaatgagatgacctacatatttgatttgctg cataaaaagcactactttgaagtgctgatgaggaagaagttggatccgagcggtaccctg aagacagccctgctggactacatcaaacgctgtcgcccgggagacagtgagaagcacaac atgattgctctgtgcttcagcatgtgccgggagatcggggagaatcacgaggcagctgcc tgcatccaactgaaattgatcgagtctcagccctgggaggaccgcctcaaggacgggcac cacctgaagcagctgctgctgaaagccctgactctgatgctggatgcagcagagagttat gccaaggactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataaca ctgcagattcactttctgaacactggccagaacacaatgctcatcaacctgggccgccac aggctgatggactgcatcattgctctacctcggttctaccaggcttctattgtggctgag gcctatgactttgttcctgattgggctgaaattctataccaacaagtgattgttaaagga gactttaattacttggaagaatttaagcagcaaaggttattaagatctagtgtatttgaa gagatttcaaaaaaatacaaacagcatcagcctactgacacagctgtgaaaaacctgaag aagttattcacttattgtgaagatgtctacttgtattacaaacttgcatatgaacacaaa ttttatgacattgtaaatatgcttctgaaggaccctcaaactggctgctgtctaaaggac atgctagcaggttag

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