Panthera pardus (leopard): 109272841
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Entry
109272841 CDS
T06062
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
ppad
Panthera pardus (leopard)
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppad03009
]
109272841 (PDCD11)
Ribosome biogenesis [BR:
ppad03009
]
Eukaryotic type
90S particles
Other 90S particles
109272841 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
OB_RRP5
OB_RRP5_4th
Suf
TPR_14
TPR_19
ARM_TT21
TPR_CcmH_CycH
ARM_TT21_5th
TPR_15
DUF7017
UTP6_C
DUF2110
NRDE-2
Motif
Other DBs
NCBI-GeneID:
109272841
NCBI-ProteinID:
XP_019314852
Ensembl:
ENSPPRG00000015133
UniProt:
A0A9V1G4E3
LinkDB
All DBs
Position
Unknown
AA seq
1871 aa
AA seq
DB search
MEESFPRGGTRKTHKSEKAFQQSVEQDNLFDISTEEESTKRKKSQKGPAKTKKLKIEKRE
NSKSIREKFEILSIESLCEGMRILGCVKEVNELELVVSLPNGLKGFVQVTEICDAYTKKL
NEQVAQEEPLKDLAHLPELFSPGMLVRCVVSSVGFTERGKKSVKLSLNPKNVNEVLSAEA
LKPGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAKEYIRQKNKGAELKVGHYLNCVI
EEVKGNGGVVGLSIGHSEVSTAIATEEQNWTLNNLLPGLVVKAQVQKVTPHGLILNFLSY
FTGLVDFMHLDPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPIFLQPGRSLTRLSCQH
LGAVLEDVPVQSFSSKAGATFRLKDGALAYARLSHLSDSKNIFNAEAFKPGNTHKCRIID
YSQMDELALLSLRTSVIEAQYLRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLVPPI
HLADILIKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPAITCYADAKPGL
QTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYTGQVVKVAVLNCEPSK
ERMLLSFKLLGDPKREHTGHSQKKRRAVSVGQLVDVKVLEKTKDGLEVAVLPHNVPAFLP
IPHLSDHVANGPLLYHWLQAGDILHRVLCLSQSEGHVLLCRKPALVSTVEGGQDPKSFSE
IHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTN
VDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEEWQGVRSLMSSRDSVLIQTLAEMIP
GMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASRYHRAGQEVEPGQKKKAVILNVDMLKLE
VHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTFRF
DSEKLQVGQGVSLTLKTTEPGVTGFLLAVEGPATKRTVRQTRKDSETVDEDEEADPALVV
GAVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKLKVG
KTVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGCTALNTHTVSPLEKIK
QYQAGQTVICFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQALK
ATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKMGTVSIFHVS
DSYSEMPLEDFIPQKVVRCYVLSATDHVLTLSLRSSRTNPETKSKITDAEINSIQDIQEG
QLLRGYVKTVQPHGVLFGLGPSVVGLAQYPHVSQYSPSKKALYNRYLPEGKLLTAKVLSL
NRQKNLVELSFLPGDTGKPDVFPASLGLPLLKQEERKMEAEEQEHKGEEEQKKKNQKRKG
KKNEEGQEAVRPPGKEKSESQKPQAKKQGKRPLREPASEQEGVKKKQKKAAPSEEDDSGV
EVYYREGEEEVEERSVLPKGKPTRPAEVPRLQLSSGFIWDVGLDSLTPALPPRGESSDSE
EDDKPQQSTQKRSKKERMLEKQKAEKELSRIEEALMDPGRQPESADDFDRLLLSSPNSSI
LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSPESLTKV
FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKSVWIKYGAFLLRRGQ
AGASHRVMQRALECLPNKEHVDVIAKFAQLEFQLGDLERAKAIFENTLSTYPKRTDVWSV
YIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE
YVEAKSSVLEN
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagagaaagctttc
cagcagtcggttgaacaagacaacttatttgatatttctactgaagaggaatctaccaaa
aggaaaaagagccagaaagggccagcaaaaacaaaaaagttgaaaatcgaaaagagagaa
aacagcaagtctataagagagaagtttgaaatccttagtattgagtccctgtgtgagggg
atgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtggtgagtctcccc
aatggcctcaagggctttgtgcaagtgactgaaatctgtgatgcttacaccaaaaagctg
aatgagcaggtggctcaagaagaacctctgaaggacctggcccacttgcctgaactcttc
tcacctgggatgctggtgaggtgtgtggtgagcagtgtgggcttcacagaaaggggcaaa
aagagtgtcaagctatctctgaaccccaaaaatgtcaacgaagtgttatctgctgaggcc
ctgaagcctggcatgctgctcacaggcactgtgtccagcctggaagaccacggctaccta
gtggacattggtgttggtggggccagagctttcctgccactgcagaaagccaaggaatat
atccgacagaagaacaaaggtgctgaactgaaggtgggtcattatctgaactgcgttatt
gaagaggtgaaaggtaacggaggagttgttggtctatctattggtcattctgaagtttct
accgccattgctactgaggagcaaaactggacccttaataacttgctaccaggactggtg
gtcaaagcccaggtacagaaggtgactccacatggccttatattgaacttcctctcatac
ttcactggcctggttgactttatgcacttggatcccaagaaagctggaacatacttctca
aaccaagcagtaagggcctgtgttctctgtgtccatcctcggaccagggctgtgaggctg
agcctgcgccccatcttcctgcagcctgggcgctcactcacccggctctcctgccagcac
ctgggagcagtgctggaggacgttcctgtccagagcttttccagcaaggctggggccacc
ttcaggctgaaggatggggctctggcctatgcccggctcagccatctctccgattctaag
aacatcttcaatgccgaggccttcaagccagggaacacccacaagtgcagaatcatcgat
tacagccaaatggatgaactggctttgctctctctgaggacatctgttattgaagctcag
taccttaggtaccatgacatcaaacctggggcattggtaaagggcacggtgctgaccata
aagccatacgggatgctggtgaaagtgggcgaacaaatcaggggcctggtacctcccata
cacctggccgacatcctgataaagaatccagagaagaaataccacattggggatgaggtc
aagtgccgggttttgctttgtgatcctgaagccaagaagttgatgatgaccctgaagaaa
accctgattgagtccaaactgcctgccattacctgctatgccgatgccaagcctggtctg
cagacacacggcttcatcctcagagtcaaggactatggctgcattgtgaagttctacaat
gatgtgcagggtctagtgcccaagcatgagctcagtgccgagtatgtccctgacccagag
agggtcttttacaccggccaggtggtgaaggttgcggtgctgaactgtgagccatctaaa
gagaggatgctcttgtccttcaagctgctgggtgatccaaagagagagcatacgggacac
agtcagaagaaaagaagagctgttagtgttggacagttggtggatgtaaaggttttagag
aagaccaaggatgggctggaggtggctgttctgccccacaacgtccctgctttcctcccc
atacctcatctgtcggaccatgtcgccaacggccctctgttgtatcactggctccaggct
ggcgacatccttcacagagtcttgtgtctgagccagagtgagggacatgttctcctttgc
aggaagccagctttggtttccaccgtggagggcggccaggatcctaagagcttctcagaa
atccatcctgggatgctgctcattggttttgtgaagagcatcaaggactacggtgtgttc
gtccagttcccatcaggccttagtggactggcccccaaagctattatgagtgacaagttt
gtgacctccacaagtgaccactttgtcgaggggcagacggtggttgcaaaggtgaccaat
gtggacgaggagaagcagcgcatgctgttgtctctgcggctgtcggactgcggtctaggg
gacctggctaccaccagcctcctcctgctgagccagtgcctggaagagtggcagggtgtg
cgcagcctcatgagcagccgagactctgtgttgatccagacactggctgagatgattcca
gggatggtccttgacctagaggtgcaggaggtgttggaggatggctctgtggtgtttagt
gagggcccagtgcctggcctggtcctgagagcgagcagatatcatcgggcagggcaagag
gtggaacctgggcagaaaaagaaggctgtaatcttaaatgttgatatgttgaagttggag
gtacatgtttccctttgccacgatttggtgaatcgaaaagctaaaaagctgaagaaaggc
agtgagcaccaggcgatcgtgcagcacttggaggagtcctttgctgtcgcctccttggta
gagactggccacctggcagccttctccctgacctctcacctcaatgacaccttccgcttt
gactcagagaagttgcaggtgggacagggtgtctccctaaccctcaagaccacagaacca
ggagtgactggttttcttttggctgttgaagggccagctactaagaggactgtgagacag
acccggaaggactctgagacagtcgatgaagacgaggaagcagatccagctctggtggtg
ggtgctgtgaagaagcacaccttgtccattggggacatggtcacagggactgtcaagtcc
attaaacccactcatgtggttgtgaccctggaagacggcatcattggctgtattcatgcc
tcccacattctagatgatgttccagtgggcacatctcctactgccaagctgaaagttggg
aagacggtcactgcccgagtgattggtgggcgagacatgaaaacattcaagtttctccca
ataagtcatcccagatttattcgaaccattccggagctgagtgtccggccaagtgagctg
gagaaggatggctgcactgctctcaacactcacactgtcagccccttggagaagattaaa
cagtaccaggctggacagaccgtgatttgcttcttgaagaagtacaacgtggttaagaag
tggcttgaggtggagattgctccagacatccgggggaggattcccttgttgctcacttct
ctcagcttcaaggttctgaaacatccagataagaagttccggattggccaggccctgaag
gctacagtggttggcccagattcttccaaggccttcttgtgtctctcccttataggtcct
cacaagcttgagaaaggggaagtggccatgggccgagtggtgaaggtgactcccaaggag
gggctgactgtctccttcccctttgggaagatgggaactgttagtatatttcacgtgagt
gactcctactcagagatgcccctggaagacttcatcccccagaaggttgtcaggtgttac
gtcctgtctgctacagaccatgtattgactctgtcgctgcgatcgtctaggacaaacccg
gagacgaagagcaaaataactgatgctgagattaactccatccaggatattcaggaaggg
cagctcctgaggggctatgtgaagactgtccagccgcacggtgtgctctttggcctcggc
ccctctgttgtgggtttggcccaatacccacatgtctcccagtacagcccgtccaagaaa
gccctttataacagatacctcccggaagggaagctgcttacagccaaggtcctgagcctg
aaccgccagaagaacctggtagagctttcattcctccccggtgacactgggaagccggac
gtgtttcctgcctccctaggactgccacttctaaagcaagaggagaggaaaatggaggca
gaggagcaagagcacaaaggagaagaagagcagaagaagaagaatcagaaaaggaaaggg
aagaagaacgaggaagggcaggaggcagtgcggccgccgggcaaggagaagagcgagtcc
cagaaaccgcaggccaagaagcagggcaagcggccgctccgggagcctgcaagtgaacag
gaaggagtgaagaagaagcagaagaaagctgctccgtcagaggaagacgacagtggtgtt
gaagtgtattatcgggaaggggaagaggaggtggaagagaggagtgtgctgcccaagggg
aagccaaccaggccagcagaagtgccccggctacagctgtcctccggtttcatttgggat
gtggggctagactctctgaccccggccttaccacctcgaggagagagctcagacagtgag
gaggacgacaagccacagcagtctacgcagaagaggagcaagaaggaaaggatgttggag
aagcagaaggcagagaaagagctgtcccgcattgaggaggcactgatggatcccgggcga
cagccagagtccgcagatgattttgaccgactcttgctgagctcccccaacagctccatc
ctgtggctgcagtacatggccttccacctgcaggccacagagatcgagaaggcccgggcc
gtggctgagagggctctcaagaccatttccttcagagaggagcaggagaagctgaatgta
tgggtggctctgctgaatctagagaacatgtacggctctccggagtcactgaccaaggtc
tttgagcgggctgtgcagtacaatgagcctctcaaggtctttctccatctggctgacatc
tacaccaagtcagagaaattccaggaagctggtgagctctacaaccggatgctgaagcga
ttcaggcaggagaaatctgtctggatcaaatatggtgcctttcttctgcggaggggccag
gctggggccagtcaccgtgtgatgcagcgagccctggagtgtctgcccaataaagagcat
gtggatgtgattgccaagtttgcccagctggagttccagctaggggatttggaacgggcc
aaagccatttttgagaacacactgagcacctacccaaagcgcactgatgtctggtcggtt
tacatcgacatgaccattaagcatggcagccagaaggaagtccgggacatctttgagcgg
gtcattcatctcagcctggctcccaagcgaatgaaattcttcttcaagcgctacctggac
tatgagaaacaacacggcactgagaaggacgtgcaggccgtgaaggcgaaggccctggaa
tacgtggaagccaagagctccgtgttggagaactag
DBGET
integrated database retrieval system