Panthera pardus (leopard): 109274446
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Entry
109274446 CDS
T06062
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
ppad
Panthera pardus (leopard)
Brite
KEGG Orthology (KO) [BR:
ppad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppad03019
]
109274446 (NRDE2)
Messenger RNA biogenesis [BR:
ppad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109274446 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
ING
DUF4778
PNPase
TPR_12
Motif
Other DBs
NCBI-GeneID:
109274446
NCBI-ProteinID:
XP_019317558
Ensembl:
ENSPPRG00000006422
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MALFPAFAGIGETSGSGSARKELDWLSNPSFCAGAITSLSQQTEGATALVSEGSPLTRSP
LKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHHHKKTRRKHGQSSSSGSEPDSDSEKDKT
SRSIRDSKKESEKPNREGNAVADTGHRCIWLEDVQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWEGAATEKKHSHKHVERYFTKKSVGLMNIDGVAVGG
KTEPPSSEPVSFIPVKASDDMAPPVTTWLNPLGIYDQSTTQWLQGQGPSEQESKQPDSQT
DREHALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLR
LVLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSALAKEWQKLIFLHPNDTALWQK
YLLFCQSQFSTFTVSKIHGLYGKCLSTLSAVKDGSILSHPALPGTEDAMFGLFLQQCHFL
RQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRVGEKGARGWRA
WMHQQERGGWVVISPDDDDDEPEDEDQEIREKSLPRWQIWLATERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIAQSMIRLSSQDLQFQLVAAFLQFLGVPSGLSPPASCLYLA
MDENSIFDDGLCDEMPLTFLNLSSSGVSCVGCSDPLGRRRWTRGHNREGEEFIRNIFHLV
MPLFSGRERSQLCFSWLRYEIEKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSF
CLWKQYAHLEWLLGNTEDARKVFDTALSMAGGRDLRDRELCELGLLYAGLEAELLPDPRG
AATARAVHVLTRLTEQGPCGPYSGQALAVHILKARKAYEHALQDCLGDSCVSAPAPSDSF
DRLTSLVKCFMLFQYLTVGIDAAVRVYEQVLAKLKGSVPPGGSGPEDGARAQGPHGALEA
VTLMHTSLLRFHTKVSLYPLAPLRQALSEALRLYPGNQVLWRAYVQIQSRSHAASETRRF
FDAVTRSTKLLEPWLFAIEAEKMRKRLVESVQRVDGREVHATIPETGLTHRIRALFENAL
RSDNGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEHFPEEMQEV
LDLMTEKELRVRLPVEELALLLED
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcagcgccagg
aaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagc
caacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccct
ctgaaatcagagccttcggatgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaactaggagaaaa
cacggccagtccagtagcagtgggtctgagccagatagtgattctgaaaaggataaaact
tccagaagcattagagacagtaaaaaggaatccgagaaaccaaaccgagaagggaacgcc
gtcgctgatactgggcaccgctgcatctggcttgaggacgttcaggctctcacaggggaa
accttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccga
ggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaag
cagtgcatatcctgggagggggctgccacagaaaagaagcactcacacaagcatgtcgag
cgctatttcacaaagaagagcgtgggactgatgaacattgacggagtcgccgttggcggt
aaaaccgaacctccctcatctgagccggtctcatttatcccagtgaaggcctcggatgat
atggctcctcctgttacgacctggttgaaccctctggggatttatgatcagtccaccacg
cagtggttacaaggacagggtccttcagagcaagaatcaaagcagccagactcacagaca
gacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggag
aatccccgggatattcagctgtggatggcatttgttgcttttcaggacgaggtcatgaag
agccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgagg
ctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagc
gtggacctgaaacttgccaagctgaagctctgctccgagttctgggagccctccgccctg
gccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaa
taccttttattctgccagagccagtttagcacctttacggtgtcaaaaattcacggtctg
tatggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcacccc
gccctgccgggcaccgaggacgccatgtttggtctctttcttcagcaatgccacttcctg
cggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcacc
ttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgag
cccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcg
tggatgcaccagcaggagcggggcggctgggtggtcatcagtccagatgatgatgatgat
gagccagaagatgaggaccaggaaataagagagaagagcctgcccaggtggcagatctgg
cttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagacc
aagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacatt
gcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggccttt
ctgcagttcctgggcgtgccttctggcctcagccctccagcctcctgcctctacctggcc
atggatgagaacagcatcttcgatgacgggctttgtgacgaaatgccactgacttttctc
aacctttcctcttccggtgtcagctgtgttggctgctcagacccactgggccgccggcgc
tggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtg
atgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgag
atcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacaggga
aagaactgcaagaaactagccaaaaatctcctgaaggagccagaaaaccgcaacagtttc
tgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccagg
aaggtgttcgatacggcgctcagcatggcggggggcagagacctgagggaccgtgagctg
tgtgagctcggcctcctctacgccgggctggaggcggagctgttgccggacccgagaggg
gccgccacggcgcgagccgttcacgtactgaccaggctgacggagcaggggccctgcggg
ccctactccgggcaggcgctggccgttcacatcttgaaagctcggaaggcgtacgaacac
gcgctgcaggactgtttgggcgacagctgtgtgtccgctccggctcccagcgactccttc
gaccgcctgactagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatc
gatgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttccccca
gggggctccggcccggaggacggagcccgcgcccagggcccccacggcgcgctggaggcc
gtgacgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctg
gctcctctgcgccaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctt
tggcgggcgtacgtgcagattcagagcaggtcccacgcagccagtgagaccagaagattt
ttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggcc
gagaaaatgaggaagagactggtggagagtgttcagagggtagatggtagagaggtccac
gccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttg
cggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtt
tccttaggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaactgtccc
tgggcgaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaggaggtc
ctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgctt
ctgctggaggactag
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integrated database retrieval system