KEGG   Panthera pardus (leopard): 109274446
Entry
109274446         CDS       T06062                                 
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
  KO
K26109  nuclear exosome regulator NRDE2
Organism
ppad  Panthera pardus (leopard)
Brite
KEGG Orthology (KO) [BR:ppad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppad03019]
    109274446 (NRDE2)
Messenger RNA biogenesis [BR:ppad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109274446 (NRDE2)
SSDB
Motif
Pfam: NRDE-2 TPR_14 HAT_PRP39_N HAT_Syf1_CNRKL1_N ING DUF4778 PNPase TPR_12
Other DBs
NCBI-GeneID: 109274446
NCBI-ProteinID: XP_019317558
Ensembl: ENSPPRG00000006422
LinkDB
Position
Unknown
AA seq 1164 aa
MALFPAFAGIGETSGSGSARKELDWLSNPSFCAGAITSLSQQTEGATALVSEGSPLTRSP
LKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHHHKKTRRKHGQSSSSGSEPDSDSEKDKT
SRSIRDSKKESEKPNREGNAVADTGHRCIWLEDVQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWEGAATEKKHSHKHVERYFTKKSVGLMNIDGVAVGG
KTEPPSSEPVSFIPVKASDDMAPPVTTWLNPLGIYDQSTTQWLQGQGPSEQESKQPDSQT
DREHALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLR
LVLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSALAKEWQKLIFLHPNDTALWQK
YLLFCQSQFSTFTVSKIHGLYGKCLSTLSAVKDGSILSHPALPGTEDAMFGLFLQQCHFL
RQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRVGEKGARGWRA
WMHQQERGGWVVISPDDDDDEPEDEDQEIREKSLPRWQIWLATERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIAQSMIRLSSQDLQFQLVAAFLQFLGVPSGLSPPASCLYLA
MDENSIFDDGLCDEMPLTFLNLSSSGVSCVGCSDPLGRRRWTRGHNREGEEFIRNIFHLV
MPLFSGRERSQLCFSWLRYEIEKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSF
CLWKQYAHLEWLLGNTEDARKVFDTALSMAGGRDLRDRELCELGLLYAGLEAELLPDPRG
AATARAVHVLTRLTEQGPCGPYSGQALAVHILKARKAYEHALQDCLGDSCVSAPAPSDSF
DRLTSLVKCFMLFQYLTVGIDAAVRVYEQVLAKLKGSVPPGGSGPEDGARAQGPHGALEA
VTLMHTSLLRFHTKVSLYPLAPLRQALSEALRLYPGNQVLWRAYVQIQSRSHAASETRRF
FDAVTRSTKLLEPWLFAIEAEKMRKRLVESVQRVDGREVHATIPETGLTHRIRALFENAL
RSDNGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEHFPEEMQEV
LDLMTEKELRVRLPVEELALLLED
NT seq 3495 nt   +upstreamnt  +downstreamnt
atggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcagcgccagg
aaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagc
caacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccct
ctgaaatcagagccttcggatgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaactaggagaaaa
cacggccagtccagtagcagtgggtctgagccagatagtgattctgaaaaggataaaact
tccagaagcattagagacagtaaaaaggaatccgagaaaccaaaccgagaagggaacgcc
gtcgctgatactgggcaccgctgcatctggcttgaggacgttcaggctctcacaggggaa
accttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccga
ggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaag
cagtgcatatcctgggagggggctgccacagaaaagaagcactcacacaagcatgtcgag
cgctatttcacaaagaagagcgtgggactgatgaacattgacggagtcgccgttggcggt
aaaaccgaacctccctcatctgagccggtctcatttatcccagtgaaggcctcggatgat
atggctcctcctgttacgacctggttgaaccctctggggatttatgatcagtccaccacg
cagtggttacaaggacagggtccttcagagcaagaatcaaagcagccagactcacagaca
gacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggag
aatccccgggatattcagctgtggatggcatttgttgcttttcaggacgaggtcatgaag
agccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgagg
ctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagc
gtggacctgaaacttgccaagctgaagctctgctccgagttctgggagccctccgccctg
gccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaa
taccttttattctgccagagccagtttagcacctttacggtgtcaaaaattcacggtctg
tatggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcacccc
gccctgccgggcaccgaggacgccatgtttggtctctttcttcagcaatgccacttcctg
cggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcacc
ttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgag
cccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcg
tggatgcaccagcaggagcggggcggctgggtggtcatcagtccagatgatgatgatgat
gagccagaagatgaggaccaggaaataagagagaagagcctgcccaggtggcagatctgg
cttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagacc
aagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacatt
gcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggccttt
ctgcagttcctgggcgtgccttctggcctcagccctccagcctcctgcctctacctggcc
atggatgagaacagcatcttcgatgacgggctttgtgacgaaatgccactgacttttctc
aacctttcctcttccggtgtcagctgtgttggctgctcagacccactgggccgccggcgc
tggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtg
atgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgag
atcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacaggga
aagaactgcaagaaactagccaaaaatctcctgaaggagccagaaaaccgcaacagtttc
tgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccagg
aaggtgttcgatacggcgctcagcatggcggggggcagagacctgagggaccgtgagctg
tgtgagctcggcctcctctacgccgggctggaggcggagctgttgccggacccgagaggg
gccgccacggcgcgagccgttcacgtactgaccaggctgacggagcaggggccctgcggg
ccctactccgggcaggcgctggccgttcacatcttgaaagctcggaaggcgtacgaacac
gcgctgcaggactgtttgggcgacagctgtgtgtccgctccggctcccagcgactccttc
gaccgcctgactagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatc
gatgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttccccca
gggggctccggcccggaggacggagcccgcgcccagggcccccacggcgcgctggaggcc
gtgacgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctg
gctcctctgcgccaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctt
tggcgggcgtacgtgcagattcagagcaggtcccacgcagccagtgagaccagaagattt
ttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggcc
gagaaaatgaggaagagactggtggagagtgttcagagggtagatggtagagaggtccac
gccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttg
cggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtt
tccttaggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaactgtccc
tgggcgaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaggaggtc
ctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgctt
ctgctggaggactag

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