Pseudomonas palleroniana: LDL65_02375
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Entry
LDL65_02375 CDS
T09728
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02020
Two-component system
ppae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LDL65_02375
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LDL65_02375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppae02022
]
LDL65_02375
02035 Bacterial motility proteins [BR:
ppae02035
]
LDL65_02375
Two-component system [BR:
ppae02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
LDL65_02375
Bacterial motility proteins [BR:
ppae02035
]
Flagellar system
Flagellar assembly proteins
Others
LDL65_02375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
AAA
AAA_3
FleQ
HTH_30
MerR
AAA_19
HTH_20
HTH_24
nSTAND3
HTH_11
Sigma70_r4_2
HTH_23
AAA_7
AAA_22
ATPase
HTH_28
NACHT
AAA_14
HTH_17
TIP49
HTH_Mga
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
UOP11430
LinkDB
All DBs
Position
complement(513699..515075)
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AA seq
458 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEEALEAVEQEAFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALMELVARHALG
VMPAVESEGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSSRAKQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERPADIIPLAERLLNNHVKKMKHAQARLSAEAQACLIGYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAMGSAAAPLPTLAPAPVVAEAETGGALGDDLRRREFQMIIDTLRTER
GRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaggttttattggtggaagacgatcgcgccctgcgtgaagcattggctgac
acgctgctgttggcgggccatgactaccgggcggtcggttctgccgaggaagccttggag
gcggtcgagcaagaggctttcagcctggtggtcagcgacgtcaacatgccgggcatggac
ggtcatcagttgctcggcctgctgcgcgcgcgccagccgcagttgccggtattgctgatg
accgctcatggcgcggtggagcgcgcggtggacgccatgcgtcagggcgcggctgattac
ctggtcaagcccttcgagcccaaagccttgatggaactggttgcccggcatgccctgggg
gtgatgcctgccgtcgaaagcgaaggcccgattgcctttgaaccggccagcgctcaattg
ctggagcttgccgcacgagtggcgcgcagcgactccaccgtgttgatttccggcgagtcc
ggcaccggcaaggaggtgttggcgcgttatatccaccagcagtccagtcgtgccaagcaa
ccctttattgcgatcaactgcgcggcaatccccgacaacatgctcgaagccaccctgttc
ggtcatgaaaagggctcgttcaccggcgccatcgcggcccaggccggcaagttcgaacag
gccgatggcggcactattttgctcgacgagatttccgaaatgcctctgggcctgcaagcc
aagctgctgcgggtgttgcaggagcgtgaggtggagcgggtcggtgcgcgcaagccgatc
cagttggatatccgcgtggtggcaacgaccaaccgcgacctggcgggcgaagtggcggcg
gggcggttccgggaagacttgttctatcggctctcggtctttccgctggcctggcgcccg
ttgcgtgagcgtccggccgatatcatcccactggccgagcgcctgctgaacaaccacgtc
aaaaaaatgaagcatgcccaggcgcggctgtcggctgaagcccaggcttgcctgatcggc
tatccgtggcccggtaatgtgcgggagttggacaacgcgatccagcgtgcgctgattttg
cagcagggcgggctgatccagccgcaagacttctgcctggccatgggcagtgcggcggca
ccgttgccaacgttggcgcccgcgccggtagtcgccgaagccgaaaccggcggtgccctg
ggggatgatctgcggcgccgagaattccagatgatcatcgacaccttgcgtaccgagcgt
ggccgtcgcaaagaggccgccgagcgcttgggcatcagcccgcgcacgttgcgctacaag
ctggcgcagatgcgtgacgccggtatggatgtggaagcgtatcttttcgctacctga
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