Pseudomonas palleroniana: LDL65_02810
Help
Entry
LDL65_02810 CDS
T09728
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ppae
Pseudomonas palleroniana
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppae03009
]
LDL65_02810
Enzymes [BR:
ppae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDL65_02810
Ribosome biogenesis [BR:
ppae03009
]
Prokaryotic type
rRNA helicases
LDL65_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
UOP11511
LinkDB
All DBs
Position
complement(606035..607381)
Genome browser
AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPVLN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM
LFSATTGGSTLRDMVAQVLKNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKTGAKSPTKRRIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgccggtgcaagcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacggctcaaaccggcagcggcaagaccgccgctttcgtcctgccggtactgaac
cgcctgatcggcccggccaaagttcgcgtcagtatcaagaccctgatcctgctgccgacc
cgtgagctggcccagcagaccttgaaggaagtggaacgtttctcgcaattcaccttcatc
aagtccggcatcattaccggcggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggacatcctgatcggcaccccgggccgcatgatcgagcaactcaacgccggcaac
ctcgacctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgatgatgtgcagcgcctggtgggcgagtgcgtcaatcgccagcagaccatg
ctgttctccgccaccaccggtggctcgaccctgcgcgacatggtcgcccaggtgttgaaa
aaccctgagcacctgcaggtcaacaacgtcagcgacctgaacgcgaccacgcgtcagcag
atcgtcaccgccgaccacaatgtgcacaaagagcagatcctcaactggctgttggccaac
gagacctatcagaaggctatcgtgttcaccaacacccgtgctgccgccgaccgtatctat
ggccgcctggtggctcaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gaccgcaaactggccattgaccgtctcaaggccggcggcgtgaaaatcctcgtggccacc
gacgttgccgcccgtggcctggatgtcgacggcctggacctggtgatcaacttcgacatg
ccccgcagcggcgacgagtacgtgcaccgtatcggccgtaccgggcgtgccggtaacgat
ggcttggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcattgaacgc
tacctgaagcagtcgttcgagcgtcgtaccatcaaggaagtcaaaggcacctacaccggt
ccgaaaaaggtcaaggcgtcgggcaaggctgtcggtgtgaagaagaaaaaaaccgacgcc
aagggcgacaagaagaagactggcgccaagtcgccgaccaagcgcaggatcgccaaccgg
ccgaagaccgacaacctgtcgctcgtcagcaaggacggtatggctccgctcaagcgccgc
aagccagaagcgccagccgccgagtag
DBGET
integrated database retrieval system
