Pseudomonas palleroniana: LDL65_03040
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Entry
LDL65_03040 CDS
T09728
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03030
DNA replication
ppae03430
Mismatch repair
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL65_03040 (dnaX)
03430 Mismatch repair
LDL65_03040 (dnaX)
03440 Homologous recombination
LDL65_03040 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppae03032
]
LDL65_03040 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_03040 (dnaX)
Enzymes [BR:
ppae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL65_03040 (dnaX)
DNA replication proteins [BR:
ppae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDL65_03040 (dnaX)
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDL65_03040 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
TIP49
AAA_18
AAA_30
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UOP11557
LinkDB
All DBs
Position
complement(655225..657288)
Genome browser
AA seq
687 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSADAPRQPLKPVGISQATVDSAKPVAGAAVVAPVVAAPAPVVPVHEPEPEPVPASVAE
PEPEPEPVVEPEPEPVVDLPWNDPVEAEMAPAVEPVLETTGEQPELTPMPTPTPDSVVPD
APEWVSAPVPEPTVAQVEAATPGMDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHTAEPA
PEPEAEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLISIEGDHWLLHLDPAHSAL
FNATQQRRLNDALNQYHERTLTISIELIKPEQETPAQAATRRRINRQREAEDSIHGDPLI
QQMMQQFGAVVRQDTIEPVEAPVPQAS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tacctgttcaccggtacacgtggggtgggcaagaccaccattgcgcgcatcatcgccaaa
tgcctgaactgtgaaaccggcatcacctcgacaccctgcggcacctgctcggtgtgccgg
gaaatcgatgaagggcgtttcgtcgacctgatcgagatcgacgccgcgagccgtaccaag
gtcgaagacacccgcgagctgctcgataacgtgcagtacgcaccgagtcgtggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccactccttcaacgccttgttg
aaaaccctggaagagccgccgccctacgtcaagttcatcctggccaccaccgacccgcag
aagcttcctgcaacgattttgtcgcggtgcctgcagttctccctgaaaaacatgaccccc
gagcgggtggtcgagcatttgacccacgtgctgggcgtcgagaacgtgccgttcgaagac
gacgcgctgtggctgctcggtcgtgctgccgatggttcgatgcgcgatgccatgagcctt
accgaccaggccatcgcctttggtgaaggcaaggtcatggccgccgatgtgcgcgccatg
ctcggcaccctcgaccacggtcaggtcttcgatgtgctgcacgcgctgatcgaaggcgac
gccaaggcgttgctcgaagccgtgcgccacctgtcggagcaaggcccggactggaacggc
gtgctctcggaaatcctcaatgtgctgcaccgggtcgccattgcccaggcgctgcctgaa
ggcgtcgacaacggccatggcgaccgcgaccgcgtgctggccctggcccaggcattgccg
gccgaagatgtgcagttctactaccagatgggcctgatcggccgtcgggacctgcccctg
gcaccggacccgcgtggcggttttgagatggtcctgctgcggatgctggccttccggccc
gcggactcggcagacgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgccaaaccagtggctggcgcggcggtggtcgcgccagtggttgctgcgccc
gcgccggttgtgccggttcatgaacctgagcctgaacctgtgcctgcttcggtagctgaa
cctgagccggaaccggaacctgtcgtcgagcccgagcccgagccggtcgtcgacctgccc
tggaatgatccggtggaagccgagatggcgccggccgtggagcccgtgctggaaaccacc
ggcgaacagccggaactgacgccgatgcccacgccgaccccggacagcgtggtgcccgac
gcccctgagtgggtcagcgcgccggttcccgagccgaccgtggcccaggtggaggccgcc
acgccaggcatggacctcgacgacgaaccgccgctggacgaagactacatcgagccggat
atggattcggcctacagctacctggatgacctggccagcgaacacaccgccgagccggcc
ccggagcccgaagccgagcctgctgcggcaccggccaccggcctggcgttgcaatggctg
gagttgttcccgaaattgccgatttccggcatgaccggcagtatcgccgccaactgcacg
ctgatctccatcgaaggcgatcactggctgttgcacctggacccggcccatagcgcgctg
ttcaacgccacacagcagcgtcgtctcaacgatgccctgaaccagtaccatgagcgcacg
ctgacgatcagcatcgagttgatcaagcccgagcaggaaacgccggcgcaggccgccacg
cgtcggcgtatcaaccgccagcgcgaagcggaagactcgatccatggtgatccgcttatc
cagcaaatgatgcaacagttcggcgcagtcgttcgccaagatacaattgaacctgtcgaa
gccccggtgccccaggcatcctga
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