Pseudomonas palleroniana: LDL65_04635
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Entry
LDL65_04635 CDS
T09728
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LDL65_04635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppae03021
]
LDL65_04635
Transcription machinery [BR:
ppae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LDL65_04635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_3
HTH_28
GerE
HTH_24
HTH_31
Terminase_5
DUF3080
HTH_10
HTH_11
HTH_5
Xre-like-HTH
TetR_C_20
DUF722
Motif
Other DBs
NCBI-ProteinID:
UOP11846
LinkDB
All DBs
Position
complement(994632..995141)
Genome browser
AA seq
169 aa
AA seq
DB search
MSGADTSHSDYVGGLFRSHYAWLCGRLHRHLDSRAHAEDIAADTFVQLLSAPGVVPIRQP
RALLTTIAQRLVYQLWRRRDLERAYLSALDNDEASTAPSAQELAQMLEALQAIDQLLDGL
PAKVKATFLLSQLNGLTYPEIAAELGISQRSVSDYMNRAFNRCLRLCVE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacacttctcacagcgattacgtgggcgggttattccgcagtcattac
gcctggctgtgcggccgcctgcaccgtcacctcgattcccgcgcacatgccgaagacatc
gccgccgatacctttgtccagctcctgagtgcaccgggtgtggtacccatccgccagcct
cgcgccttgctcaccaccatcgcccagcgcctggtgtaccagttgtggcgccgccgtgat
ctggagcgtgcctacctcagtgcactcgataacgacgaagcttcaactgcaccgtctgca
caagagctggcgcagatgcttgaggcgctgcaagccattgaccagttgctcgacggcttg
ccggccaaggtcaaggcgaccttcctgctgtcccagctcaatggcctgacttacccggaa
atcgccgccgagctggggatttcccagcgctcggtcagcgactacatgaaccgtgccttc
aaccgttgcctgcggctgtgcgtggaatga
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integrated database retrieval system
