Pseudomonas palleroniana: LDL65_04720
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Entry
LDL65_04720 CDS
T09728
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00061
Fatty acid biosynthesis
ppae00071
Fatty acid degradation
ppae01100
Metabolic pathways
ppae01212
Fatty acid metabolism
ppae02024
Quorum sensing
ppae04146
Peroxisome
Module
ppae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LDL65_04720 (fadD1)
00071 Fatty acid degradation
LDL65_04720 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LDL65_04720 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LDL65_04720 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppae01004
]
LDL65_04720 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppae04147
]
LDL65_04720 (fadD1)
Enzymes [BR:
ppae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LDL65_04720 (fadD1)
Lipid biosynthesis proteins [BR:
ppae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LDL65_04720 (fadD1)
Exosome [BR:
ppae04147
]
Exosomal proteins
Exosomal proteins of breast milk
LDL65_04720 (fadD1)
Exosomal proteins of breast cancer cells
LDL65_04720 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
UOP11863
LinkDB
All DBs
Position
complement(1008217..1009908)
Genome browser
AA seq
563 aa
AA seq
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MNEDFWKDKYPAGIAAQINPDEYQNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTSVKHVIVTEVADLLSPFKRLLINSVIKYVKKMVPAYH
LPKAIKFNDVLAKGQGQPVNDVSPASGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCNICEGYGM
TETSPVATVNPSQSIQIGTIGIPVPSTVCKVIADDGAELPLGETGELCIKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEHIKIFIVVKPGATLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacttttggaaggataagtaccccgccgggattgctgcacaaatcaatcca
gacgagtatcagaatattcaggcggtactgaaacagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagacgatcacctacggtgaactgtacgaattgtccggt
gcctttgccgcctacctgcaacagcacaccgacttgaagcctggcgaccgaatcgccgtg
caactgcccaacgtcctgcaatacccggtcgcggtattcggcgccatccgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaatgat
tccggggccaaggccctggtctgcctggccaacatggcgcacctggcggaaaaggtcgta
cccaagacctccgtcaagcacgtgatcgtcactgaagtcgctgacctgttgtcgccgttc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaaaatggtcccggcctatcac
ttgcccaaggcgatcaagttcaacgatgtgctggccaaggggcaggggcaaccggtcaac
gacgtcagcccggccagtggcgatgtggccgttctgcagtacaccggcggcaccaccggc
gtggccaagggcgcgatgctgacccatcgtaacctggtcgccaacatgctgcagtgcaag
gcgctgatgggctccaacctcaacgagggttgcgagatcctgatcacgccgctgccgctg
taccacatctacgcgttcacctttcattgcatggcgatgatgttgatcggcaaccacaac
atcctgatcagcaacccacgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggttttgtcgggctgaataccttgttcgtggcgctgtgcaataacgaaggcttc
cgcaagctggacttctctgcactcaaagtcaccctgtcgggcggcatggccttgcagctc
gccgccgccgaacgttggaaggccgtcaccggctgcaacatctgcgaaggctatggcatg
accgaaaccagcccggtggccacggtcaacccgagccagagcattcagatcgggaccatc
ggtattccggtaccgtcgacggtatgcaaagtcatcgccgacgacggcgccgagttgccg
ctgggcgaaaccggcgagctgtgcatcaaaggcccgcaggtgatgaaggggtattggcag
cgcgaagacgccaccgccgagatcctcgacagcgaaggctggctgaagaccggtgacatc
gcgatcatccagccggacggctacatgcgcattgtggaccgcaagaaggacatgattctg
gtctccggtttcaacgtctaccccaatgagctggaagacgtgctggcagccctgccgggc
gtgctgcaatgcgcggccatcggcgtgccggacgagaagtccggggaacacatcaagatc
ttcatcgtggtcaagccaggggccaccctgaccaaggaccaggtgatggagcatatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtcgagttccgcgatgcgttgccgacc
accaacgtgggcaagatcctgcgccgtgaattgcgcgatgaagagctgaagaaactcggc
ctcaaaaagtaa
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