Pseudomonas palleroniana: LDL65_05825
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Entry
LDL65_05825 CDS
T09728
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ppae
Pseudomonas palleroniana
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppae03009
]
LDL65_05825 (der)
Ribosome biogenesis [BR:
ppae03009
]
Prokaryotic type
GTPases
LDL65_05825 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
DUF5906
Ras
NOG1
AAA_24
AAA_18
NTPase_1
SRP54
cobW
SRPRB
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
UOP12070
LinkDB
All DBs
Position
complement(1250903..1252372)
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANKI
DNIDPELARAEFSPMGLGDAIPIAGAHGRGISQMLEIALSSFPKDDVEEEEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERN
EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDFVKTELQRRLFFVEFADIHFISALHGTGVGNLYASV
QNSFRSAVTRWPTSRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQIE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRLMSHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgacctaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggcaaagtggcaagggcgctcctacattattgtcgacaccggtggtatt
tccggtgacgagcatggcatggacgaaaaaatggccgagcagtcgctgctggccatcgaa
gaagccgatgtcgtgttgttcctggtggatgcccgtgcgggctataccgctgccgaccag
atgattggcgagcacctgcgcaagcgcaacaagcgttcctatgtggtcgccaacaagatc
gacaacatcgatcctgagttggcccgtgccgaattcagcccgatgggcctgggtgatgcg
atcccgatcgccggtgcccacggtcgcggcatcagccagatgctggaaattgccctgagc
agtttccccaaggatgatgtcgaggaagaagagggtgaggaagagatcgtcgccgaaggt
gaggaagccaagcgcattccaggcccgagcgagaaagacggtatcaagatcgccatcatc
ggccgcccgaacgtcggcaagtcgacgctggtcaaccgcatgctcggtgaggaccgggtt
atcgtgtacgaccaacccggcaccacccgcgacagcatctacatcccgttcgaacgtaac
gaggaaaagtacacgctgatcgacaccgccggtgtgcgcaagcgcggcaagatccacgag
gaagttgaaaagttctccgtggtgaaaaccctgcaggccatcaaggacgccaacgtggtg
atctttgtgatggacgcccgcgaaggcgtggtagaccacgacctcaacctgctgggcttt
gccctggaggccggtcgcgcactggtcatcgcgatcaacaagtgggacggcatgacgccg
agcgagcgcgatttcgtcaagaccgagttgcagcgtcgcctgttcttcgtcgagttcgcc
gatatccactttatctcggcactgcacggcactggcgtgggcaacctctatgcgtccgta
cagaactcgttcaggtctgcggtcacccgctggcccacaagccgcctgacccagatcctg
gaagacgccgttggcgagcacgcgccgccgatggtcaacaaccgccggatcaaactgcgt
tacgcccacttgggcggtgccaacccgccgattatcgtgatccacggtaaccagatcgag
aaggtgccgaaatcctatgtgcgttacctggaaaacacctaccgtcgtgtcttgaagctg
gtcggtacgccgatccgtatcgagttcaaaggtggcgagaacccatacgaaggcaacaag
aacaccttgactgaccgtcaggtgaacaagaagcgtcgtttgatgagccaccataagaag
gccgacaagaagcgccgcgataagcgctga
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