Pseudomonas palleroniana: LDL65_06580
Help
Entry
LDL65_06580 CDS
T09728
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDL65_06580 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_06580 (recC)
Enzymes [BR:
ppae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LDL65_06580 (recC)
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDL65_06580 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UOP12216
LinkDB
All DBs
Position
complement(1405460..1408912)
Genome browser
AA seq
1150 aa
AA seq
DB search
MPQATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLNPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLETAPEGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKTGMPVTL
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSESEPRTLLNQL
QDDILELRPLNETRELWPAVDLERDTSIRFHIAHSAQREVEILHDQLLQRFSADPTLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGVRWGLNAEQRAGLGLPNELEQNS
WRFGLRRMLLGYAVGTGGAYEGIEPYDEIGGLDAALIGPLVALLDALSDAHHALSQPATP
QEWGERLQRLMQRFFLASSEHDDYLLGQLEQLRETWLETCDSVGLYDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQLRDHLASGWQNAQ
PHTSLIDAMTQEHPLQPFSARYFHAGDPLFSYAREWQLLHETPDAMAQAYELADHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALVR
PDHVDHALNAQALRLQGSGLLPMVGFGECLRNELIEPLPGLLQRYQQLLALWPTPHTGAE
PVSFEHQGIRLEGWISGLHRRNDGGLLSVTTIPNSIGSIKARKWHRLIRPWVNHVVACAC
GLSLSTALVASDDTLLLAPLEPSAAQEILGNLLLAWHTGMRKPLPVAVKTAFAWLGQTDP
AKALAAASKAYEGDGLTHDGERRETPALTRQFPDYATLIASEEFEGWCETLYRPLINAPW
RSLTSSQAST
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagcgacgtccctcagcgctggattcatggtggttcacggcaaccgcctggat
gaactgcgcagcctggtggtcagttggatgcggcgctaccctctggcgcctctggaaaac
gagatcgccttggtacaaagcaacggcatcgcccagtggctcaagctagccctggctgaa
gatccggaagatgacgacatgggcggctgcggaatcgccgccgcaatcgatgtgcagctc
cccggcagctttatgtggcagctttaccgaatggtcctgggccgtgacgaaatcccgcct
aaatccctgctcgataaagctccactgacctggcgtctcatgcgcctactcccggaactc
atcgaccagccgcatttcgagccgctacagcgcttccttacccacgacacggatttgcgc
aagcgctaccaactcgccgagcgcctggccgacctgttcgaccaataccaggtttaccgc
gccgactggctggaagactgggcagccggccggcatcaactgcgtaacggacgaggcgaa
tccaagccgctcaaccccgccaattgctggcaagccgaattgtggcgagcgttgttgctg
gatgtgggggaagaaggcatggccgagagtcgtgcaggcgtccaccaacgtttcatcgag
cgcatcaatacactggagacggcccctgaaggtctaccgtcgcgggtgatcgtgttcggc
atttcatcgctgcccgcccaagcgctggaagcactcgccggtctggcacgcttcagccag
gtgctgctgtgcgttcacaacccatgccgtcaccattggtccgacatcgtcgctgacaaa
gacttgctgcgtaacgaatataaacgccaggcccgtaaaaccgggatgccggtcaccctc
gacccgcaaaccctgcatcagcacgcacacccgctactcgccgcctggggcaaacaaggg
cgtgactacatcagcctactggacagctacgacgaccccaacagctaccgcgccgcattc
cgtgacggccgcatcgatctgttcagtgaaagtgaaccgcgcacgttgctcaatcaattg
caggacgacattctcgaactgcgcccgctcaatgaaacacgcgagctatggccggctgtt
gatctggagcgcgatacttcaatccgcttccatatcgcccacagcgcccaacgcgaggtg
gagatcctccacgaccagttgctgcaacgcttcagtgccgaccccacgttgcgcccccga
gacatcatcgtcatggtccccgacgttgacagctatgcgccgcacattcgcgccgtattc
ggacagcttgagcgaaatgacccacgctttatccccttcaccctcaccgaccagggccaa
cgcggtcgcgatccgctattgatcgccgtcgaacatctgctgaaactccccgacagccgc
ttccccgtcagtgaaatcctcgacttgctcgatgtccccgccttgcgcgaacgtttcgcc
atcaaggaacgcgacctgccgacgctgcaccgctggatcgaaggcgccggcgtgcgctgg
gggctcaacgccgaacagcgtgccggcctgggtctgccgaatgagttggagcaaaacagc
tggcgatttggcttgcgccgcatgcttctgggctacgcggtcggcaccggtggagcctac
gaaggcatcgagccctatgatgaaatcggtggcctcgacgctgccctgattggcccactg
gtggccttgcttgacgcgctgagtgatgcacatcacgcactctcgcaacctgcgaccccc
caagaatggggtgagcgcctgcaacgtctgatgcaacgcttcttcctggccagcagcgaa
cacgatgactacctgttgggccaactcgaacaactcagggagacctggctggagacctgc
gattccgttggcctatacgacgagttacccctcactgtcgtccgtgaagcctggttggcc
ggccttgaccaggggcgtctgtcccagcgcttcctcgccggcgctgtcaatttctgcacg
ctgatgcccatgcgggcgatcccgttcaagctggtctgcctgctcggcatgaacgacggc
gattacccacgtgcccaaccgccgctggacttcgacctgatgggcagcgactaccgcccc
ggtgaccgctcacgtcgcgaagacgaccgttacctgctgctcgaagcgctgctgtcggcc
cgcgaccagctctatatcagttgggtgggccgcagcatccgtgacaacagcgatcgcccg
gcctcggtactgattggccaactgcgtgaccatctcgccagtggctggcagaacgcacaa
ccacacacatcgctgatcgacgcgatgacccaggaacacccgctccaacccttcagcgcg
cgttactttcacgcaggcgatccgctcttcagctacgcccgcgaatggcagttgctgcac
gaaacgcctgacgccatggcgcaagcatacgaactggccgatcaccaacaggaagaaccc
ctgagcctcggccagttgcaggacttcctgcgtaacccggtcaaacatttcttcagccag
cgtctgaaagtgttctttgaggccgccgaagtgcccttggccgatgaagaacccttcgtc
ctcgacgcactgcaacgctacagcctcagcgacagcctgctgaacgccgcgctggtcaga
cccgatcacgtggaccacgcgctcaatgcccaagccctgcgtctgcaaggcagtggcctg
ttacccatggtcggttttggcgagtgcctgcgcaacgagttgatcgagcccttacccggc
ctgttgcaacgctaccagcaactgctagcgctctggcccaccccacacacaggggcagaa
ccggtcagttttgagcatcagggcattcggttggagggctggatcagcggcctgcatcgg
cgcaacgatggtggactgttaagcgtcaccaccatccccaacagcatcggttcgatcaag
gcgcgcaagtggcaccgcctgattcgcccgtgggttaatcatgtggtggcctgtgcgtgc
ggtctgtcactcagtaccgctctggtggcgagcgatgacacgttgctactggccccgctg
gagccatcggcggcccaggaaatcctcggcaacctgctattggcctggcacactggcatg
cgcaaaccgcttccggtagccgtaaaaaccgcgttcgcctggctcggccagaccgatccg
gccaaggccctggcggctgcaagcaaagcctacgaaggcgatggtttgacccacgacggc
gaacgccgcgaaaccccggcgctcacccgacaatttcccgactacgcaacgcttatcgcc
agcgaagaattcgaaggttggtgcgaaaccctgtaccgcccactgatcaacgccccatgg
cgatcgctcaccagttcgcaggccagcacatga
DBGET
integrated database retrieval system
