Pseudomonas palleroniana: LDL65_06775
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Entry
LDL65_06775 CDS
T09728
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL65_06775 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppae03019
]
LDL65_06775 (pnp)
03016 Transfer RNA biogenesis [BR:
ppae03016
]
LDL65_06775 (pnp)
Enzymes [BR:
ppae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LDL65_06775 (pnp)
Messenger RNA biogenesis [BR:
ppae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LDL65_06775 (pnp)
Transfer RNA biogenesis [BR:
ppae03016
]
Prokaryotic type
tRNA degradation factors
LDL65_06775 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UOP12250
LinkDB
All DBs
Position
complement(1453389..1455494)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAPQAEA
TELLSAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgacgacgacgtcaccgta
ttggtgaccgttgtaggtgccaagaccgctgacccgagcaaaggctttttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagattcctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggtcgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggcggccctggccatc
tccggcattcctttcgatggtccgatcggtgctgcccgcgttgcattccacgaaagcacc
ggctacctgctgaacccgacttacgagcaattgaaagcttcgagcctggacatggtcgtt
gccggtacttcggaagccgtgttgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgctgtactgtttgcccacgacgagttccaggctgtcatcaaggccgtc
accgagctggctgccgaagctgccaagccaacctggacctgggctccacaagctgaagcg
actgaactgctgagcgctatccgctccgagttcggtgctgcgatctccgatgcctacacc
atcaccgtcaaggccgaccgttacgctcgcctgggcgaactgaaggaccaggtcgtggcc
aagctgtccggtgaagaaggccagccttccgccagcgacgtcaaagctgcattcggtgaa
atcgaataccgtaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgt
gacactcgcaccgtacgtccgctgaacatcgaagtcggcgttctgcctaaaacccacggt
tcggctctgttcacccgtggtgaaacccaggccctggtagtcgcgactctgggtactgcc
cgtgacgcacagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgcggtcgcatgggtggtgctggtcgtcgc
gaaatcggtcacggccgcctggcgcgccgttcggttcaggccatgctgcctgcggctgac
gtgttcccgtacaccatccgtgttgtgtcggaaatcactgaatccaacggttccagctcg
atggcttccgtttgcggtgcttccctggcattgatggacgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggttaaagaaggcgagaagttcgccattctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgcc
aaaggtgtgaccgcgttgcagatggacatcaagatcaaaggcatcaccgaagagatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaatatcctcggccagatgaaccag
atcattggtcagtcgcgtaccgaactgtcggaaaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgactattcgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggctgaagctgcacgtcagcgcgttctgggcatcaccgccgaggcc
gagatcggcaagatctacgtcggtaaagttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaagacggtctggtacacatctccatgctgagcgatgctcgtgtc
gagaaagtgaccgacattctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtagcagcagccaaggcgtcgggc
gtttaa
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