Pseudomonas palleroniana: LDL65_07135
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Entry
LDL65_07135 CDS
T09728
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00260
Glycine, serine and threonine metabolism
ppae00460
Cyanoamino acid metabolism
ppae00630
Glyoxylate and dicarboxylate metabolism
ppae00670
One carbon pool by folate
ppae00680
Methane metabolism
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01120
Microbial metabolism in diverse environments
ppae01200
Carbon metabolism
ppae01230
Biosynthesis of amino acids
ppae01240
Biosynthesis of cofactors
ppae04981
Folate transport and metabolism
Module
ppae_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LDL65_07135
09102 Energy metabolism
00680 Methane metabolism
LDL65_07135
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LDL65_07135
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LDL65_07135
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LDL65_07135
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LDL65_07135
Enzymes [BR:
ppae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LDL65_07135
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UOP12313
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Position
1533875..1535128
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAKV
FIDRGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtggtcgagcagttggcgattgat
cgcgccaaagaactgttcggtgccgattacgccaacgtccagccgcacgccggctcccaa
gccaacagcgcggtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggttgaacacaagccgaaaatgatcgtggccggtttctctgcctactcacagatc
ctggatttcccacgcttccgcgccattgccgacaaagtcggcgcttacctgttcgtcgac
atggcccacgtggcgggcctggtcgccgctggcgtctacccgaacccggtgccttacgct
gatgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgccgtcttcccaggcgcccag
ggtggcccgctggagcacgtgatcgcggccaaggcgatctgcttcaaggaagccctgcaa
cctgagttcaaggcttaccagcaacaagtggtgaaaaacgcccaggccatggccaaagtg
tttatcgaccgcggctttgacgtggtatccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgctgacgctgccctgggcaaagccttc
atcaccgtgaacaagaactcggtaccgaacgacccacgttcgccgttcgtcacctccggc
ctgcgcttcggcaccccggctgtgaccactcgtggcttcaaggaagcagagtgcaaggaa
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagccgtgatcgacgcg
gtccgtgagaaggtcaaggccatctgcaaaaagctgccggtatacggcgcttga
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