Pseudomonas palleroniana: LDL65_07340
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Entry
LDL65_07340 CDS
T09728
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03030
DNA replication
ppae03430
Mismatch repair
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL65_07340
03430 Mismatch repair
LDL65_07340
03440 Homologous recombination
LDL65_07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppae03032
]
LDL65_07340
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_07340
Enzymes [BR:
ppae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL65_07340
DNA replication proteins [BR:
ppae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDL65_07340
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDL65_07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UOP12354
LinkDB
All DBs
Position
complement(1576297..1576908)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSHCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDYELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLNSYAQLPHTGKAHRALADAEMAANLTAYLAQELRGTHGLRELSHD
LLCTLQKVPAAKITEHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcaccccgagcagccactgc
cgggccacggaaatcgcggtggtcatcctcgagcgcggccagatcgtggatcgctaccag
agcctgatgaacgccggtgtgcgtgtgccgggctttatcgagcaactcaccggcatcagt
aacgccatgctgcgcagcgcaccgccggccgagcgtgtgatgaacgaggtcaacgagttc
gtcggcacgacgccactgctggcgcacaacgcggcattcgaccagaagttctgggactat
gagctgggcctgatccgccgcacccgcctgcagaaattcgcctgctcgctgttactcgcc
cgccgtctgatgcccgcggcgcccaaccacaaactcggcaccctcaacagctacgcccag
ttgccccacaccggcaaggctcaccgggcgctggcggatgcggagatggcggccaacctc
acggcgtacctggcccaggaactgcgcgggactcacggcttgcgcgaactctcccacgac
ctgctgtgcaccttgcagaaagtgccggcggcgaagatcaccgaacacctgaagaagcac
cgcgggttctga
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