Pseudomonas palleroniana: LDL65_07440
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Entry
LDL65_07440 CDS
T09728
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppae
Pseudomonas palleroniana
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppae03016
]
LDL65_07440 (miaB)
Enzymes [BR:
ppae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LDL65_07440 (miaB)
Transfer RNA biogenesis [BR:
ppae03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LDL65_07440 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UOP12373
LinkDB
All DBs
Position
1597681..1599009
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARV
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEIIHLAENGVREVTLLGQNVNGYRGQTHDGRMADLAELIRVVAAVDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSYSFVYSPRPGTPAADLADDTPEALKKE
RLNALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLLP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacaccaggccctggaagtcaccgcccgcgccgaagat
gccgacgtgatcctgctcaacacctgctcgatccgcgaacgagcccaggaccgtgtgtac
tcccagttgggccgttggcgcgaattgaagctggcgaacccggagatggtaatcgccgtc
ggcggctgcgtggccagccaggaaggtgctgcgatccgcgaccgcgcgccctatgtcgat
gtggtcttcggcccacagaccctgcaccgcctgccggaaatgatcgacgccgcccgcgtg
accaagttgccgcaggtcgatgtctcgttcccggaaatcgaaaaattcgaccacttgccc
gagccgcgcatcgacgggccgagcgcctacgtgtcggtgatggaaggctgcagcaagtac
tgcaccttctgcgtagtgccttacacacgcggtgaagaagtcagccggccgtttgacgat
gtgctgtcggaaatcatccacctggccgaaaacggcgtgcgcgaagtgaccctgctgggc
cagaacgtcaatggctaccgcggccagacccatgatggacgaatggccgacctggcggaa
ctgatccgcgtggtggccgcggtcgacggcatcgaacgcattcgctacaccacctcccat
ccgctggagttctccgacagcctgatccaggcccacgccgaagtaccggaactggtcaag
cacctgcacttgccggtgcagtcgggctcggaccgcattctggcggccatgaagcgcaac
cacaccgcgctggaatacaaatccaaactgcgcaaactgcgggcggcggtgccgggcatc
tgcatcagctcggacttcatcgtcggcttcccgggcgagaccgaaaaagacttcgagcag
accatgaagctgatcgaagatgttggtttcgacttttcctactcgttcgtctacagcccg
cgcccgggcaccccggccgccgatctggcggacgacacccccgaagcgctgaaaaaagaa
cgcctgaacgcactgcagcatcgcctgaaccagcaaggtttcgagatcagccgacaaatg
gtcggctcgatccagcgcatcctggtcaccgactattcgaaaaaggacccgggcgaactg
caaggccgcaccgagaacaaccgaatcgtcaacttccgctgcgacaatccgaccctgatc
ggccaattcgccgacgtgcacatcgacgcggcgcaaccgcactcgttgcgcgggtcgtta
ttgccgtga
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